RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 OR5A2Q8NGI9 324 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 SAP25Q8TEE9 199 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 APOBEC3DQ96AK3 386 aaPredicted RBP11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 WDFY3Q8IZQ1 3526 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 XKRY2A2RUG3 117 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 ZNF705GA8MUZ8 300 aaPredicted RBP11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 H7BYZ3 331 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 AMBPP02760 352 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 GALR1P47211 349 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 SLC38A11Q08AI6 406 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 JOSD1Q15040 202 aaPredicted RBP11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 ZNF66Q6ZN08 573 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 OR51B6Q9H340 312 aa11.87□□□□□ -0.51
VPS9D1-202ENST00000561976 ARGFXA6NJG6 315 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 LRRC3CA6NJW4 275 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 DVL1O14640 695 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 SLC31A2O15432 143 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 WDR1O75083 606 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 OTX2P32243 289 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 USF2Q15853 346 aaPredicted RBP11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 C21orf62-AS1Q17RA5 79 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 CYP2G1PQ6ZSU1 146 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 DLL3Q9NYJ7 618 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 LRP5LA4QPB2 252 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 DEGS1O15121 323 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 CLDN1O95832 211 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 PFN1P07737 140 aaKnown RBP11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 GZMBP10144 247 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 NDUFB7P17568 137 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 PLA2G5P39877 138 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 PSMB3P49720 205 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 IDH3GP51553 393 aaPredicted RBP11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 LYSMD4Q5XG99 296 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 TMEM9BQ9NQ34 198 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 PI4KAP42356 2102 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 NCKAP5O14513 1909 aa11.86□□□□□ -0.51
VPS9D1-202ENST00000561976 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 ANKRD30BLA7E2S9 258 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 KBTBD11O94819 623 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 CXCL12P48061 93 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 FOXG1P55316 489 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 HLA-BQ31612 363 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 ACSF3Q4G176 576 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 DBX2Q6ZNG2 339 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 LINC00596Q86U02 117 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 MYPOPQ86VE0 399 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 RPP25LQ8N5L8 163 aaKnown RBP11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 SLC25A22Q9H936 323 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 LIN7CQ9NUP9 197 aaKnown RBP11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 TAS2R60P59551 318 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 RPL23P62829 140 aaKnown RBP11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 RTP5Q14D33 572 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 P2RY6Q15077 328 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 ZNF573Q86YE8 665 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 DEPPQ9NTK1 212 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 TRAPPC2LQ9UL33 140 aa11.85□□□□□ -0.51
VPS9D1-202ENST00000561976 TRBV6-6A0A0A6YYG2 114 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 GZMHP20718 246 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 NRN1LQ496H8 165 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 OR4F5Q8NH21 305 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 OR4F4Q96R69 305 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 FREM1Q5H8C1 2179 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 ZNF503-AS2A6NEH8 195 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 LILRA1O75019 489 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 IGLV2-14P01704 120 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 ZNF585BQ52M93 769 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 DMRTC2Q8IXT2 367 aaPredicted RBP11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 OR51G1Q8NGK1 321 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 TMEM45BQ96B21 275 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 AGMATQ9BSE5 352 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 ELOVL1Q9BW60 279 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 PARLQ9H300 379 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 PRDM6Q9NQX0 595 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 PINLYPA6NC86 204 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 SIRPB1O00241 398 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 RHBDL1O75783 438 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 GNG3P63215 75 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 IGFBP7Q16270 282 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 SSX2Q16385 188 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 TUSC5Q8IXB3 177 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 OR5T1Q8NG75 326 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 OR51I2Q9H344 312 aa11.84□□□□□ -0.51
VPS9D1-202ENST00000561976 A0A1W2PR80 420 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 PLP2Q04941 152 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
VPS9D1-202ENST00000561976 PYGO2Q9BRQ0 406 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms