RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 IL36RNQ9UBH0 155 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 A0A1W2PQD3 144 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 ORM1P02763 201 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 HIST1H1BP16401 226 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 PLP1P60201 277 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 C3AR1Q16581 482 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 TM4SF19Q96DZ7 209 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 MPC1Q9Y5U8 109 aa8.89□□□□□ -0.99
GTF3C1-202ENST00000561623 IGHV1OR21-1A0A087WYE8 117 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 SHISA3A0PJX4 238 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 ATP5J2P56134 94 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 OR2M3Q8NG83 312 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 OR4B1Q8NGF8 309 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 FAM216AQ8WUB2 273 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 OR2H1Q9GZK4 316 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 RNPS1Q15287 305 aaKnown RBP8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 TEPPQ6URK8 271 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 CCL17Q92583 94 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 CXXC4Q9H2H0 198 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 RAXQ9Y2V3 346 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 SPAG17Q6Q759 2223 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 KNL1Q8NG31 2342 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 LEMD1Q68G75 181 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 OR4A4PQ8NGN8 299 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 NPDC1Q9NQX5 325 aaPredicted RBP8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 TUBD1Q9UJT1 453 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 OR2T8A6NH00 312 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 PLPPR5Q32ZL2 321 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 AQP3Q92482 292 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 C10orf35Q96D05 121 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 C5orf66Q9H5L9 145 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 TBX21Q9UL17 535 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 A0A1W2PPE3 182 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 HIST1H1EP10412 219 aaKnown RBP8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 SLC36A1Q7Z2H8 476 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 TINAGQ9UJW2 476 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 TRAV38-1A0A0B4J264 116 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 FAM157AC9JC47 383 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 ADAM11O75078 769 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 AESQ08117 197 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 ZNF841Q6ZN19 808 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 TEX29Q8N6K0 151 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 TUBA4BQ9H853 241 aa8.88□□□□□ -0.99
GTF3C1-202ENST00000561623 UPK3AO75631 287 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 RBM11P57052 281 aaKnown RBP8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 FXYD3Q14802 87 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 KIAA1644Q3SXP7 199 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 TMEM92Q6UXU6 159 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 CCL19Q99731 98 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 FOXJ2Q9P0K8 574 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 KCNE5Q9UJ90 142 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 TNFRSF1AP19438 455 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 NPIPB9F8W1W9 429 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 FSTP19883 344 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 FOXL2P58012 376 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 SERF2P84101 59 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 C2orf68Q2NKX9 166 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 SPINK14Q6IE38 97 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 PRNTQ86SH4 94 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 MYOZ1Q9NP98 299 aaPredicted RBP8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 ZFP30Q9Y2G7 519 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 ACP1P24666 158 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 SOX8P57073 446 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 TNFAIP6P98066 277 aaPredicted RBP8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 PXMP4Q9Y6I8 212 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 SCTP09683 121 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 ASAH2BP0C7U1 165 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 CTAG1AP78358 180 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 DMRTA1Q5VZB9 504 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 LRRC3BQ96PB8 259 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 RASL10BQ96S79 203 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 ZDHHC8Q9ULC8 765 aa8.87□□□□□ -0.99
GTF3C1-202ENST00000561623 OR2A4O95047 310 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 C9orf40Q8IXQ3 194 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 LINC00469Q8N7U9 141 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 OR2A7Q96R45 310 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 RNF122Q9H9V4 155 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 PIPOXQ9P0Z9 390 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 SCN9AQ15858 1988 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 DANCRP0C864 163 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 GLIPR1P48060 266 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 LILRA6Q6PI73 481 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 FADS6Q8N9I5 356 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 NGFRP08138 427 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 SRD5A2P31213 254 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 RAC3P60763 192 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 ST6GALNAC3Q8NDV1 305 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 PERPQ96FX8 193 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 TMEM222Q9H0R3 208 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 ASCL3Q9NQ33 180 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 IGHV3OR15-7A0A075B7D8 119 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 ZNF716A6NP11 495 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 A8MXK9 166 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 hADV38S2A0JD32 116 aa8.86□□□□□ -0.99
GTF3C1-202ENST00000561623 LNP1A1A4G5 178 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms