RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CTRLP40313 264 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 GUCA1AP43080 201 aaPredicted RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 NPBWR2P48146 333 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 CSNK1A1P48729 337 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 RGS6P49758 472 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 LCN2P80188 198 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 TNFAIP6P98066 277 aaPredicted RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 UNC119Q13432 240 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 HIST3H3Q16695 136 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 KCTD19Q17RG1 926 aaPredicted RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 C10orf128Q5T292 105 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 MRPL2Q5T653 305 aaKnown RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 CLEC6AQ6EIG7 209 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 LCN12Q6JVE5 192 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 ANKRD26P1Q6NSI1 321 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 C8orf74Q6P047 294 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 ACP7Q6ZNF0 438 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 RPS27LQ71UM5 84 aaKnown RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 SLC16A14Q7RTX9 510 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 ZNF429Q86V71 674 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 PUSL1Q8N0Z8 303 aaKnown RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 MNS1Q8NEH6 495 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 OR8B3Q8NGG8 313 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 OR51G1Q8NGK1 321 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 OR5D16Q8NGK9 328 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 OR4A15Q8NGL6 344 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 OR52P1PQ8NH57 321 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 KLF14Q8TD94 323 aaPredicted RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 C10orf82Q8WW14 230 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 ZNF414Q96IQ9 312 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 OR8B2Q96RD0 313 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 RARRES2Q99969 163 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 SLC22A4Q9H015 551 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 WDR55Q9H6Y2 383 aaPredicted RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 TMEM27Q9HBJ8 222 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 SLCO1B3Q9NPD5 702 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 TMEM38BQ9NVV0 291 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 SLC25A37Q9NYZ2 338 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 ATPIF1Q9UII2 106 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 USH1CQ9Y6N9 552 aa2.5□□□□□ -2.01
HERC1-215ENST00000561436 PHF3Q92576 2039 aaKnown RBP2.5□□□□□ -2.01
HERC1-215ENST00000561436 TGP01266 2768 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 RTTNQ86VV8 2226 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ISPDA4D126 451 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ZNF879B4DU55 563 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 COPEO14579 308 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 SERPINB7O75635 380 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 MMP7P09237 267 aaPredicted RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 NQO1P15559 274 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 PPIBP23284 216 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 STOMP27105 288 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 GRPRP30550 384 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 CASQ1P31415 396 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 S100A3P33764 101 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 RPS5P46782 204 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 SRP9P49458 86 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 GDI2P50395 445 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 ZNF92Q03936 586 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 FUT5Q11128 374 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ECH1Q13011 328 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 FADDQ13158 208 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 CLINT1Q14677 625 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 MAD2L1BPQ15013 274 aaPredicted RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 WHAMMP3Q1A5X7 153 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 DEFB112Q30KQ8 113 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ZNF404Q494X3 552 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 AVPI1Q5T686 147 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 FAM27BQ5VT28 67 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 TNFAIP8L2Q6P589 184 aaPredicted RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 DHRS4L2Q6PKH6 230 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ZCCHC23Q6ZST2 131 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 LHFPL3Q86UP9 236 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 LRP11Q86VZ4 500 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 MREGQ8N565 214 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 NPBQ8NG41 125 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 OR5L1Q8NGL2 311 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 OR13G1Q8NGZ3 307 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 OR5J2Q8NH18 312 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 OR5AK3PQ8NH89 298 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 PLPPR1Q8TBJ4 325 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ITFG2Q969R8 447 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 MCUR1Q96AQ8 359 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 SGK3Q96BR1 496 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ZNF799Q96GE5 643 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 PANX1Q96RD7 426 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 CENPHQ9H3R5 247 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 CCNB1IP1Q9NPC3 277 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 MYEF2Q9P2K5 600 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 ZNF229Q9UJW7 825 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ZNF443Q9Y2A4 671 aaPredicted RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 CSDC2Q9Y534 153 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 KPTNQ9Y664 436 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 TLN2Q9Y4G6 2542 aa2.49□□□□□ -2.01
HERC1-215ENST00000561436 ANK3Q12955 4377 aaKnown RBP2.49□□□□□ -2.01
HERC1-215ENST00000561436 RYR3Q15413 4870 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 MEGF8Q7Z7M0 2845 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 MXRA5Q9NR99 2828 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 A0A075B6Q4 140 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 TRBV6-6A0A0A6YYG2 114 aa2.48□□□□□ -2.01
HERC1-215ENST00000561436 TRAV39A0A0B4J263 110 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms