RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	LY6G6F	Q5SQ64	297 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	LPCAT3	Q6P1A2	487 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNF788	Q6ZQV5	615 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	DRAXIN	Q8NBI3	349 aa	Predicted RBP	6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	UXS1	Q8NBZ7	420 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNRF1	Q8ND25	227 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	DEFB108B	Q8NET1	73 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	OR5M8	Q8NGP6	311 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	OR13A1	Q8NGR1	328 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	OR1L1	Q8NH94	360 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	MRGPRD	Q8TDS7	321 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	CASTOR1	Q8WTX7	329 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	IL1F10	Q8WWZ1	152 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	OR2A7	Q96R45	310 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	CHIA	Q9BZP6	476 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	FAM234A	Q9H0X4	552 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	DNTTIP1	Q9H147	329 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	NCOR1P1	Q9H4R4	102 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNF665	Q9H7R5	613 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	NAA60	Q9H7X0	242 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	SLC2A9	Q9NRM0	540 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	CBLN4	Q9NTU7	201 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	SHPK	Q9UHJ6	478 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	OPN4	Q9UHM6	478 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	FBXO9	Q9UK97	447 aa	Predicted RBP	6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	OR2W1	Q9Y3N9	320 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	MAB21L2	Q9Y586	359 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	PPIAL4E	A0A075B759	164 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	TRAV38-1	A0A0B4J264	116 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395		A0A1B0GW55	424 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	PPIAL4D	F5H284	164 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395		G3V3Q6	166 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	C15orf65	H3BRN8	121 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	GPR31	O00270	319 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	KCNAB3	O43448	404 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	SIX6	O95475	246 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	CD8A	P01732	235 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4L2	P0CJ85	424 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4L3	P0CJ86	424 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4L4	P0CJ87	422 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4L5	P0CJ88	424 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4L6	P0CJ89	424 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4L7	P0CJ90	424 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	PPIAL4F	P0DN26	164 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	HLA-G	P17693	338 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	GNRHR	P30968	328 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	SSTR5	P35346	364 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	CR1L	Q2VPA4	569 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	PHLDA2	Q53GA4	152 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DCAF12L2	Q5VW00	463 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	LIN54	Q6MZP7	749 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	C11orf88	Q6PI97	169 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4L9	Q6RFH8	374 aa	Predicted RBP	6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DTX2	Q86UW9	622 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	LDLRAD3	Q86YD5	345 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	SGPP2	Q8IWX5	399 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	FAM185A	Q8N0U4	392 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	PRR18	Q8N4B5	295 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	FAM216B	Q8N7L0	139 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	TPRX1	Q8N7U7	411 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNF565	Q8N9K5	539 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	CCDC71L	Q8N9Z2	235 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	OR5D13	Q8NGL4	314 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	OR2T35	Q8NGX2	323 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	COQ8A	Q8NI60	647 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	UBALD1	Q8TB05	177 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	SECTM1	Q8WVN6	248 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	CCL17	Q92583	94 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	GALM	Q96C23	342 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	GALNT14	Q96FL9	552 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	CCL13	Q99616	98 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	VRK1	Q99986	396 aa	Predicted RBP	6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DCTN5	Q9BTE1	182 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	C19orf24	Q9BVV8	132 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	SLC5A7	Q9GZV3	580 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	RANBP3	Q9H6Z4	567 aa	Predicted RBP	6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	UBTD1	Q9HAC8	227 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	RDH8	Q9NYR8	311 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	DUX4	Q9UBX2	424 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	PPIAL4A	Q9Y536	164 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	KIAA2026	Q5HYC2	2103 aa		6.23	□□□□□ -1.41
TPM1-231	ENST00000561395	SVEP1	Q4LDE5	3571 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	CCS	O14618	274 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	TNFRSF13B	O14836	293 aa	Predicted RBP	6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	SPINT2	O43291	252 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	HSPA12A	O43301	675 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	RGS11	O94810	467 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	SOD3	P08294	240 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	DANCR	P0C864	163 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	IL2RG	P31785	369 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	LUM	P51884	338 aa	Predicted RBP	6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	EDDM3B	P56851	147 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	HTD2	P86397	168 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	SRSF4	Q08170	494 aa	Known RBP	6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	TMEM187	Q14656	261 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	GNMT	Q14749	295 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	HFE	Q30201	348 aa		6.22	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNF818P	Q6ZRF7	136 aa		6.22	□□□□□ -1.41

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