RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 MBNL3Q9NUK0 354 aaKnown RBP8.11□□□□□ -1.11
HERC1-212ENST00000561348 OR1A1Q9P1Q5 309 aa8.11□□□□□ -1.11
HERC1-212ENST00000561348 JPT1Q9UK76 154 aa8.11□□□□□ -1.11
HERC1-212ENST00000561348 HSF4Q9ULV5 492 aa8.11□□□□□ -1.11
HERC1-212ENST00000561348 MMP24Q9Y5R2 645 aa8.11□□□□□ -1.11
HERC1-212ENST00000561348 A0A1W2PPI3 338 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 ZNF736B4DX44 427 aaPredicted RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 NAPSAO96009 420 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 HIST1H1DP16402 221 aaKnown RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 RAB6AP20340 208 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 KIR2DS4P43632 304 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 OR3A3P47888 321 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 DYNLT3P51808 116 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 PROK1P58294 105 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 GNG2P59768 71 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 KRTAP10-3P60369 221 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 HMGN3Q15651 99 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 SLC25A48Q6ZT89 311 aaKnown RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 MOB1BQ7L9L4 216 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 CENPVQ7Z7K6 275 aaPredicted RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 OR8H3Q8N146 312 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 OR5H6Q8NGV6 325 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 RTN4IP1Q8WWV3 396 aaPredicted RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 YIPF6Q96EC8 236 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 ABHD14BQ96IU4 210 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 RBM14Q96PK6 669 aaKnown RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 FUNDC2Q9BWH2 189 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 ZNF702PQ9H963 129 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 Q9N2K0 584 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 FBLN5Q9UBX5 448 aa8.1□□□□□ -1.11
HERC1-212ENST00000561348 ELF5Q9UKW6 265 aaPredicted RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 RBM7Q9Y580 266 aaKnown RBP8.1□□□□□ -1.11
HERC1-212ENST00000561348 TRAV18A0A075B6X5 111 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 TMEM235A6NFC5 223 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 FOXI3A8MTJ6 420 aaPredicted RBP8.09□□□□□ -1.11
HERC1-212ENST00000561348 TRDCB7Z8K6 153 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 RAB27BO00194 218 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 OR2F2O95006 317 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 GSTT2P0CG29 244 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 GSTT2BP0CG30 244 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 ZBTB25P24278 435 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 RPS19P39019 145 aaKnown RBP8.09□□□□□ -1.11
HERC1-212ENST00000561348 VBP1P61758 197 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 NCS1P62166 190 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 HTD2P86397 168 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 NSUN5P1Q3KNT7 163 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 TMEM30BQ3MIR4 351 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 IGSF11Q5DX21 431 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 KHDC1LQ5JSQ8 128 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 Q6ZPA2 131 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 ZNF554Q86TJ5 538 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 LINC00311Q8N616 119 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 ZNF439Q8NDP4 499 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 OR2T10Q8NGZ9 312 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 SGMS2Q8NHU3 365 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 GINS4Q9BRT9 223 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 PARP12Q9H0J9 701 aaKnown RBP8.09□□□□□ -1.11
HERC1-212ENST00000561348 RANBP3Q9H6Z4 567 aaPredicted RBP8.09□□□□□ -1.11
HERC1-212ENST00000561348 RHBDL2Q9NX52 303 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 MGAT4AQ9UM21 535 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 KCNK7Q9Y2U2 307 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 MOB4Q9Y3A3 225 aa8.09□□□□□ -1.11
HERC1-212ENST00000561348 DNHD1Q96M86 4753 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 SAA2-SAA4A0A096LPE2 208 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 H7C2Y5 167 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 MFNGO00587 321 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 FABP7O15540 132 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 YPEL1O60688 119 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 FCGR3AP08637 254 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 SAA2P0DJI9 122 aaPredicted RBP8.08□□□□□ -1.12
HERC1-212ENST00000561348 GPR12P47775 334 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
HERC1-212ENST00000561348 RPL39P5Q59GN2 51 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 GPR107Q5VW38 600 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 STEAP3Q658P3 488 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 GLDNQ6ZMI3 551 aaPredicted RBP8.08□□□□□ -1.12
HERC1-212ENST00000561348 C16orf82Q7Z2V1 217 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 DRAXINQ8NBI3 349 aaPredicted RBP8.08□□□□□ -1.12
HERC1-212ENST00000561348 OR10J5Q8NHC4 309 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 FAM110DQ8TAY7 271 aaPredicted RBP8.08□□□□□ -1.12
HERC1-212ENST00000561348 NUDCD2Q8WVJ2 157 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 CFHR4Q92496 578 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 EAF1Q96JC9 268 aaPredicted RBP8.08□□□□□ -1.12
HERC1-212ENST00000561348 YPEL2Q96QA6 119 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 S1PR3Q99500 378 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 MRPL20Q9BYC9 149 aaKnown RBP8.08□□□□□ -1.12
HERC1-212ENST00000561348 RDH8Q9NYR8 311 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 LINC00527Q9UJ94 153 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 ZNF221Q9UK13 617 aa8.08□□□□□ -1.12
HERC1-212ENST00000561348 SERPINE3A8MV23 424 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 M0QZ24 198 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 RAB29O14966 203 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 TXNL1O43396 289 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 FBXO24O75426 580 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 MOSP00540 346 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 OR8U9P0C7N5 309 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 SMIM18P0DKX4 95 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 CD28P10747 220 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 KIR2DS1Q14954 304 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms