RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 YPEL2Q96QA6 119 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 OR4F4Q96R69 305 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 A0A087WXM4 84 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 TRBV6-6A0A0A6YYG2 114 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 SLC31A2O15432 143 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 TNFAIP8O95379 198 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 TMEM11P17152 192 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 CD1BP29016 333 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 REG1BP48304 166 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 MORN2Q502X0 79 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 CENPVQ7Z7K6 275 aaPredicted RBP12.65□□□□□ -0.38
LMX1B-204ENST00000561065 C5orf56Q8N8D9 126 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 OR2AK2Q8NG84 335 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 OR8H1Q8NGG4 311 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 OR2T10Q8NGZ9 312 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 OR1L1Q8NH94 360 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 RAB3CQ96E17 227 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 CMSS1Q9BQ75 279 aaKnown RBP12.65□□□□□ -0.38
LMX1B-204ENST00000561065 C12orf4Q9NQ89 552 aa12.65□□□□□ -0.38
LMX1B-204ENST00000561065 TXNL4BQ9NX01 149 aaKnown RBP12.65□□□□□ -0.38
LMX1B-204ENST00000561065 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 IGHV1-3A0A0C4DH29 117 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 NOTOA8MTQ0 251 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 SOCS1O15524 211 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 HSPA12AO43301 675 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 FGF16O43320 207 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 TMEM127O75204 238 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 NAPSAO96009 420 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 CD3GP09693 182 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 C9orf152Q5JTZ5 239 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 ZNF439Q8NDP4 499 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 OR10V1Q8NGI7 309 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 IL1F10Q8WWZ1 152 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 EDARADDQ8WWZ3 215 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 PHF21AQ96BD5 680 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 NICN1Q9BSH3 213 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 PIPOXQ9P0Z9 390 aa12.64□□□□□ -0.39
LMX1B-204ENST00000561065 ZBTB25P24278 435 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 TALDO1P37837 337 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 ZNF137PP52743 207 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 CLDN12P56749 244 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 HNF4GQ14541 408 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 C5orf24Q7Z6I8 188 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 Q8N6K4 173 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 RTN4IP1Q8WWV3 396 aaPredicted RBP12.63□□□□□ -0.39
LMX1B-204ENST00000561065 ST6GALNAC6Q969X2 333 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 S1PR3Q99500 378 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 GFI1Q99684 422 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 ABHD14AQ9BUJ0 271 aa12.63□□□□□ -0.39
LMX1B-204ENST00000561065 TMEM272A0A1B0GTI8 110 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 NCBP2LA6PVI3 153 aaKnown RBP12.62□□□□□ -0.39
LMX1B-204ENST00000561065 SERPINE3A8MV23 424 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 LANCL1O43813 399 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 MOSP00540 346 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 CD36P16671 472 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 SERPINB10P48595 397 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 TMEM50BP56557 158 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 EBI3Q14213 229 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 KIR2DS1Q14954 304 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 HMGN3Q15651 99 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 NEDD8Q15843 81 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 CT45A1Q5HYN5 189 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 ZNF880Q6PDB4 577 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 Q6ZPA2 131 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 CROCCP3Q8IVE0 287 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 IZUMO1Q8IYV9 350 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 OR10R2Q8NGX6 335 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 CT45A3Q8NHU0 189 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 ARHGAP5-AS1Q96IT6 56 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 NOL4LQ96MY1 436 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-204ENST00000561065 GON7Q9BXV9 100 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 PECRQ9BY49 303 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 AK3Q9UIJ7 227 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 TSSC4Q9Y5U2 329 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-204ENST00000561065 ITGB1BP1O14713 200 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 RAB29O14966 203 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 LDLRAD4O15165 306 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 PF4V1P10720 104 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 ZNF134P52741 427 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 SCAND1P57086 179 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 ZNF329Q86UD4 541 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 TSPAN14Q8NG11 270 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 OR4X2Q8NGF9 303 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 OR52L2PQ8NGH6 319 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 EAF1Q96JC9 268 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-204ENST00000561065 ATG5Q9H1Y0 275 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 LINC00527Q9UJ94 153 aa12.62□□□□□ -0.39
LMX1B-204ENST00000561065 DNAH9Q9NYC9 4486 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 LOC100506127A0A0U1RQW1 187 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 PSMB11A5LHX3 300 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 ZNF736B4DX44 427 aaPredicted RBP12.61□□□□□ -0.39
LMX1B-204ENST00000561065 TRDCB7Z8K6 153 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 IGLL1P15814 213 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 PPP1CCP36873 323 aaKnown RBP12.61□□□□□ -0.39
LMX1B-204ENST00000561065 CEACAM6P40199 344 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 OR10A3P58181 314 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms