RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 LRRTM1Q86UE6 522 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 C4orf3Q8WVX3 66 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 RITA1Q96K30 269 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 NEDD4LQ96PU5 975 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 SULT4A1Q9BR01 284 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 CHCHD6Q9BRQ6 235 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 FAAP24Q9BTP7 215 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 MRPL20Q9BYC9 149 aaKnown RBP12.68□□□□□ -0.38
SNX1-213ENST00000561026 TENM3Q9P273 2699 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 RAMP3O60896 148 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 RGS11O94810 467 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 MYF6P23409 242 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 ACTBP60709 375 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 RPS27AP62979 156 aaKnown RBP12.67□□□□□ -0.38
SNX1-213ENST00000561026 GABPB1Q06547 395 aaPredicted RBP12.67□□□□□ -0.38
SNX1-213ENST00000561026 HMGN3Q15651 99 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 C1orf100Q5SVJ3 147 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 GLT8D1Q68CQ7 371 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 OR10K2Q6IF99 312 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 PHYHIPQ92561 330 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
SNX1-213ENST00000561026 CDK1P06493 297 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 CD37P11049 281 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 HTR2CP28335 458 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 PPIFP30405 207 aaKnown RBP12.66□□□□□ -0.38
SNX1-213ENST00000561026 OR3A3P47888 321 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 LUMP51884 338 aaPredicted RBP12.66□□□□□ -0.38
SNX1-213ENST00000561026 ZNF833PQ6ZTB9 187 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 C6orf201Q7Z4U5 140 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 KCNG3Q8TAE7 436 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 ZNF251Q9BRH9 671 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 TMED9Q9BVK6 235 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 TMEM59Q9BXS4 323 aa12.66□□□□□ -0.38
SNX1-213ENST00000561026 DNAH9Q9NYC9 4486 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 KMT2CQ8NEZ4 4911 aaKnown RBP12.65□□□□□ -0.38
SNX1-213ENST00000561026 SAA2-SAA4A0A096LPE2 208 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 PTGES3LE9PB15 166 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 G3V318 75 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 HLA-DRB1P01911 266 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 SAA2P0DJI9 122 aaPredicted RBP12.65□□□□□ -0.38
SNX1-213ENST00000561026 SRMP19623 302 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 CNTFRP26992 372 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 FHL3Q13643 280 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 KIAA0141Q14154 515 aaPredicted RBP12.65□□□□□ -0.38
SNX1-213ENST00000561026 SPHARQ15513 63 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 RBM48Q5RL73 367 aaKnown RBP12.65□□□□□ -0.38
SNX1-213ENST00000561026 C9orf66Q5T8R8 295 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 CEACAM19Q7Z692 300 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 OR2AK2Q8NG84 335 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 TM2D1Q9BX74 207 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 ANKRD60Q9BZ19 345 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 IFI27L2Q9H2X8 130 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 OR51J1Q9H342 316 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 ABRACLQ9P1F3 81 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 WSB1Q9Y6I7 421 aa12.65□□□□□ -0.38
SNX1-213ENST00000561026 IGHV7-81A0A0B4J1V7 117 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 SLC22A1O15245 554 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 NBR2O15453 112 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 NAPSAO96009 420 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 QRFPP83859 136 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 UNC119Q13432 240 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 C5orf64Q2M2E5 130 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 TMEM65Q6PI78 240 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 NPBQ8NG41 125 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 OR11H1Q8NG94 326 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 IL1F10Q8WWZ1 152 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 VCXQ9H320 206 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 STEAP1Q9UHE8 339 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 SCOCQ9UIL1 159 aa12.64□□□□□ -0.39
SNX1-213ENST00000561026 LSM2Q9Y333 95 aaKnown RBP12.64□□□□□ -0.39
SNX1-213ENST00000561026 TMEM14DPA8MWL7 114 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 SEC14L6B5MCN3 397 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 IGLV1-40P01703 118 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 BLVRBP30043 206 aaPredicted RBP12.63□□□□□ -0.39
SNX1-213ENST00000561026 HSD17B12Q53GQ0 312 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 FAM71F2Q6NXP2 309 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 SVOPQ8N4V2 548 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 NICN1Q9BSH3 213 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 KCNK15Q9H427 330 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNX1-213ENST00000561026 PARP11Q9NR21 331 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 PLEKHJ1Q9NW61 149 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 PIPOXQ9P0Z9 390 aa12.63□□□□□ -0.39
SNX1-213ENST00000561026 LSM4Q9Y4Z0 139 aaKnown RBP12.63□□□□□ -0.39
SNX1-213ENST00000561026 TRAV41A0A0B4J266 112 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 I3L521 148 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 RAB29O14966 203 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 NDUFA3O95167 84 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 UCHL1P09936 223 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 RUNX1Q01196 453 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms