RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 NBR2O15453 112 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 HSPA12AO43301 675 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 IGHG4P01861 327 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 IGF1P05019 195 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 GSTP1P09211 210 aaKnown RBP9.88□□□□□ -0.83
SNX1-209ENST00000559961 SLC2A2P11168 524 aaPredicted RBP9.88□□□□□ -0.83
SNX1-209ENST00000559961 SRMP19623 302 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 HTR2CP28335 458 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 PPP1CCP36873 323 aaKnown RBP9.88□□□□□ -0.83
SNX1-209ENST00000559961 VHLP40337 213 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 ZNF134P52741 427 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 ACTBP60709 375 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 TMEM267Q0VDI3 215 aaPredicted RBP9.88□□□□□ -0.83
SNX1-209ENST00000559961 SPHARQ15513 63 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 LIN54Q6MZP7 749 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 C18orf65Q6ZTR6 163 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 MOB1BQ7L9L4 216 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 MRPL30Q8TCC3 161 aaKnown RBP9.88□□□□□ -0.83
SNX1-209ENST00000559961 ABHD5Q8WTS1 349 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 C4orf3Q8WVX3 66 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 UFD1Q92890 307 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 DUX3Q96PT4 197 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 PLGRKTQ9HBL7 147 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 PLSCR3Q9NRY6 295 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 MBNL3Q9NUK0 354 aaKnown RBP9.88□□□□□ -0.83
SNX1-209ENST00000559961 TPRKBQ9Y3C4 175 aa9.88□□□□□ -0.83
SNX1-209ENST00000559961 H7C2Y5 167 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 RAB29O14966 203 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 CDK1P06493 297 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 GNAO1P09471 354 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 OR8U8P0C7N1 319 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 NHLRC4P0CG21 123 aaPredicted RBP9.87□□□□□ -0.83
SNX1-209ENST00000559961 BLVRBP30043 206 aaPredicted RBP9.87□□□□□ -0.83
SNX1-209ENST00000559961 MC5RP33032 325 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 RPS27AP62979 156 aaKnown RBP9.87□□□□□ -0.83
SNX1-209ENST00000559961 TRAM1Q15629 374 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 LY6G6FQ5SQ64 297 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 OGFRL1Q5TC84 451 aaPredicted RBP9.87□□□□□ -0.83
SNX1-209ENST00000559961 RNLSQ5VYX0 342 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 FAM71E2Q8N5Q1 922 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 FAAP24Q9BTP7 215 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 OR51J1Q9H342 316 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 ZNF580Q9UK33 172 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 RNF150Q9ULK6 438 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 VSIG4Q9Y279 399 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 WSB1Q9Y6I7 421 aa9.87□□□□□ -0.83
SNX1-209ENST00000559961 PRKDCP78527 4128 aaKnown RBP9.87□□□□□ -0.83
SNX1-209ENST00000559961 TRAV41A0A0B4J266 112 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 ARL6IP5O75915 188 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 LY86O95711 162 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 HLA-DRB1P01911 266 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 HSMCR30P0CW71 290 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 ARSBP15848 533 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 CHATP28329 748 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 ECI1P42126 302 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 INSL3P51460 131 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 DEFB136Q30KP8 78 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 FAM53AQ6NSI3 398 aaPredicted RBP9.86□□□□□ -0.83
SNX1-209ENST00000559961 FAM71F2Q6NXP2 309 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 C6orf201Q7Z4U5 140 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 OR11H1Q8NG94 326 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 OR6M1Q8NGM8 313 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 OR1N2Q8NGR9 330 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 EDARADDQ8WWZ3 215 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 UBE2E2Q96LR5 201 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 NABP2Q9BQ15 211 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 HSPB9Q9BQS6 159 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 SULT4A1Q9BR01 284 aa9.86□□□□□ -0.83
SNX1-209ENST00000559961 MRPL20Q9BYC9 149 aaKnown RBP9.86□□□□□ -0.83
SNX1-209ENST00000559961 OR5H14A6NHG9 310 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 RBBP9O75884 186 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 VSIG8P0DPA2 414 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 ZBTB25P24278 435 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 PSMA1P25786 263 aaKnown RBP9.85□□□□□ -0.83
SNX1-209ENST00000559961 CEACAM6P40199 344 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 PSMD7P51665 324 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 GNMTQ14749 295 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 C5orf64Q2M2E5 130 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 ZNF260Q3ZCT1 412 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 C1orf100Q5SVJ3 147 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 C6orf141Q5SZD1 244 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 FAM27D1Q5T7N8 215 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 SIGIRRQ6IA17 410 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 ZNF833PQ6ZTB9 187 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 ANKRD60Q9BZ19 345 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 CCDC90BQ9GZT6 254 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 VCX3BQ9H321 246 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 SLC23A1Q9UHI7 598 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 ZNF221Q9UK13 617 aa9.85□□□□□ -0.83
SNX1-209ENST00000559961 SAA2-SAA4A0A096LPE2 208 aa9.84□□□□□ -0.83
SNX1-209ENST00000559961 CASQ2O14958 399 aaPredicted RBP9.84□□□□□ -0.83
SNX1-209ENST00000559961 SAA2P0DJI9 122 aaPredicted RBP9.84□□□□□ -0.83
SNX1-209ENST00000559961 PSMB8P28062 276 aa9.84□□□□□ -0.83
SNX1-209ENST00000559961 OR3A3P47888 321 aa9.84□□□□□ -0.83
SNX1-209ENST00000559961 ZNF616Q08AN1 781 aa9.84□□□□□ -0.83
SNX1-209ENST00000559961 CBX3Q13185 183 aa9.84□□□□□ -0.83
SNX1-209ENST00000559961 HMGN3Q15651 99 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms