RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 OVCH2Q7RTZ1 564 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 TCTEX1D1Q8N7M0 179 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 ZNF555Q8NEP9 628 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 OR52L2PQ8NGH6 319 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 DLX4Q92988 240 aaPredicted RBP7.11□□□□□ -1.27
HDDC3-204ENST00000559834 MUL1Q969V5 352 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 FLYWCH2Q96CP2 140 aaKnown RBP7.11□□□□□ -1.27
HDDC3-204ENST00000559834 ORAI1Q96D31 301 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 OR4C12Q96R67 309 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 NABP2Q9BQ15 211 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 BANF2Q9H503 90 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 MBNL3Q9NUK0 354 aaKnown RBP7.11□□□□□ -1.27
HDDC3-204ENST00000559834 GHRLQ9UBU3 117 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 EXOSC1Q9Y3B2 195 aaKnown RBP7.11□□□□□ -1.27
HDDC3-204ENST00000559834 A0A1W2PN81 502 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 CRTAPO75718 401 aaPredicted RBP7.1□□□□□ -1.27
HDDC3-204ENST00000559834 MAS1P04201 325 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 OR8U9P0C7N5 309 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 SPNP16150 400 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 MGMTP16455 207 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 FSTP19883 344 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 BLVRBP30043 206 aaPredicted RBP7.1□□□□□ -1.27
HDDC3-204ENST00000559834 MC5RP33032 325 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 CHRNA7P36544 502 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 PPP1CCP36873 323 aaKnown RBP7.1□□□□□ -1.27
HDDC3-204ENST00000559834 CAPGP40121 348 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 PLGLAQ15195 96 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 DMKNQ6E0U4 476 aaPredicted RBP7.1□□□□□ -1.27
HDDC3-204ENST00000559834 PYHIN1Q6K0P9 492 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 ACSM6Q6P461 480 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 OR2AK2Q8NG84 335 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 APH1BQ8WW43 257 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 RITA1Q96K30 269 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 RDH12Q96NR8 316 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 NEDD4LQ96PU5 975 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 SLC29A1Q99808 456 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 ELOVL1Q9BW60 279 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 MRPL20Q9BYC9 149 aaKnown RBP7.1□□□□□ -1.27
HDDC3-204ENST00000559834 TOLLIPQ9H0E2 274 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 PIPOXQ9P0Z9 390 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 ABRACLQ9P1F3 81 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 STEAP1Q9UHE8 339 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 DIMT1Q9UNQ2 313 aaKnown RBP7.1□□□□□ -1.27
HDDC3-204ENST00000559834 FOXA2Q9Y261 457 aaPredicted RBP7.1□□□□□ -1.27
HDDC3-204ENST00000559834 DNAH3Q8TD57 4116 aa7.1□□□□□ -1.27
HDDC3-204ENST00000559834 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 TRAV8-7A0A075B6U6 113 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 A0A1W2PPK0 400 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 MAGEA13PA6NCF6 341 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 RAB29O14966 203 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 PDCD6O75340 191 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 NDUFA3O95167 84 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 HSPB1P04792 205 aaKnown RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 GSTP1P09211 210 aaKnown RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 LGALS1P09382 135 aaKnown RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 CNTFRP26992 372 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 CRIP2P52943 208 aaPredicted RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 SLURP1P55000 103 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 TAS2R43P59537 309 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 CX3CL1P78423 397 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 PITPNAQ00169 270 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 SMN1Q16637 294 aaKnown RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 ECSCRQ19T08 205 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 FAM71F2Q6NXP2 309 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 ZNF833PQ6ZTB9 187 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 ODF3L1Q8IXM7 274 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 NKAIN3Q8N8D7 197 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 OR13C5Q8NGS8 318 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 ABHD5Q8WTS1 349 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 THRSPQ92748 146 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 RBMXL1Q96E39 390 aaKnown RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 TMEM80Q96HE8 168 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 Q96M66 194 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 CITED4Q96RK1 184 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 RNF5Q99942 180 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 UQCC2Q9BRT2 126 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 ALX4Q9H161 411 aaPredicted RBP7.09□□□□□ -1.27
HDDC3-204ENST00000559834 NUBP2Q9Y5Y2 271 aa7.09□□□□□ -1.27
HDDC3-204ENST00000559834 SAA2-SAA4A0A096LPE2 208 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 TRBV5-7A0A0A0MS05 114 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 OR5H14A6NHG9 310 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 RRHO14718 337 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 LDLRAD4O15165 306 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 WBP4O75554 376 aaKnown RBP7.08□□□□□ -1.28
HDDC3-204ENST00000559834 RBBP9O75884 186 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 BAG2O95816 211 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 SAA2P0DJI9 122 aaPredicted RBP7.08□□□□□ -1.28
HDDC3-204ENST00000559834 MAPK3P27361 379 aaPredicted RBP7.08□□□□□ -1.28
HDDC3-204ENST00000559834 OR3A3P47888 321 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 RPS11P62280 158 aaKnown RBP eCLIP7.08□□□□□ -1.28
HDDC3-204ENST00000559834 GNMTQ14749 295 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 AKIRIN2Q53H80 203 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 ACTBL2Q562R1 376 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 SIGIRRQ6IA17 410 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 CD200R1LQ6Q8B3 271 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 ZNF562Q6V9R5 426 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
HDDC3-204ENST00000559834 IL1F10Q8WWZ1 152 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 ARPC1AQ92747 370 aa7.08□□□□□ -1.28
HDDC3-204ENST00000559834 OR14A2Q96R54 314 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms