RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PSMB8P28062 276 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 CHATP28329 748 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 PPP1CCP36873 323 aaKnown RBP9.61□□□□□ -0.87
SPG11-219ENST00000559822 ACTBP60709 375 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 RPS27AP62979 156 aaKnown RBP9.61□□□□□ -0.87
SPG11-219ENST00000559822 CFHR3Q02985 330 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 GNMTQ14749 295 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 RBM48Q5RL73 367 aaKnown RBP9.61□□□□□ -0.87
SPG11-219ENST00000559822 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 LAIR2Q6ISS4 152 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 FAM71F2Q6NXP2 309 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 TMEM65Q6PI78 240 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 MOB1BQ7L9L4 216 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 OR52L2PQ8NGH6 319 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 KCTD7Q96MP8 289 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 NABP2Q9BQ15 211 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 FKBP14Q9NWM8 211 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 SCN3BQ9NY72 215 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 PIPOXQ9P0Z9 390 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 KIAA1456Q9P272 454 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 DNAH3Q8TD57 4116 aa9.61□□□□□ -0.87
SPG11-219ENST00000559822 NBR2O15453 112 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 BPNT1O95861 308 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 VSIG8P0DPA2 414 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 HTR2CP28335 458 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 RANBP1P43487 201 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 HMGN3Q15651 99 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 DEFB136Q30KP8 78 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 HSD17B12Q53GQ0 312 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 C1orf100Q5SVJ3 147 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 SULT4A1Q9BR01 284 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 TMED9Q9BVK6 235 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 TM2D1Q9BX74 207 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 MRPL20Q9BYC9 149 aaKnown RBP9.6□□□□□ -0.87
SPG11-219ENST00000559822 GHITMQ9H3K2 345 aa9.6□□□□□ -0.87
SPG11-219ENST00000559822 RIMS4Q9H426 269 aaPredicted RBP9.6□□□□□ -0.87
SPG11-219ENST00000559822 CHMP1AQ9HD42 196 aaPredicted RBP9.6□□□□□ -0.87
SPG11-219ENST00000559822 SAA2-SAA4A0A096LPE2 208 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 SEC14L6B5MCN3 397 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 SAA2P0DJI9 122 aaPredicted RBP9.59□□□□□ -0.87
SPG11-219ENST00000559822 SRMP19623 302 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 FHL3Q13643 280 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 SPHARQ15513 63 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 MED22Q15528 200 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 C5orf64Q2M2E5 130 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 C6orf201Q7Z4U5 140 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 CEACAM19Q7Z692 300 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 ODF3L1Q8IXM7 274 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 SVOPQ8N4V2 548 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 OR6M1Q8NGM8 313 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 IL1F10Q8WWZ1 152 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 UFD1Q92890 307 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 UBE2E2Q96LR5 201 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 URM1Q9BTM9 101 aaKnown RBP9.59□□□□□ -0.87
SPG11-219ENST00000559822 FAAP24Q9BTP7 215 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 OR51J1Q9H342 316 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 PARP11Q9NR21 331 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 PLEKHJ1Q9NW61 149 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 MGAT4AQ9UM21 535 aa9.59□□□□□ -0.87
SPG11-219ENST00000559822 TRAV41A0A0B4J266 112 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 OR5H14A6NHG9 310 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 PTGES3LE9PB15 166 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 RAB29O14966 203 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 SLC22A1O15245 554 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 NAPSAO96009 420 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 OR8U8P0C7N1 319 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
SPG11-219ENST00000559822 BLVRBP30043 206 aaPredicted RBP9.58□□□□□ -0.88
SPG11-219ENST00000559822 OR3A3P47888 321 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 INSL3P51460 131 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 LUMP51884 338 aaPredicted RBP9.58□□□□□ -0.88
SPG11-219ENST00000559822 RUNX1Q01196 453 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 INSL4Q14641 139 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 FAM27D1Q5T7N8 215 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 OR10K2Q6IF99 312 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 LIN54Q6MZP7 749 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 C11orf87Q6NUJ2 197 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 LRRTM1Q86UE6 522 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 NPBQ8NG41 125 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 OR11H1Q8NG94 326 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 SETD6Q8TBK2 473 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 MYOZ3Q8TDC0 251 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 EDARADDQ8WWZ3 215 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 ANKRD60Q9BZ19 345 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 IFI27L2Q9H2X8 130 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 SLC23A1Q9UHI7 598 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 VSIG4Q9Y279 399 aa9.58□□□□□ -0.88
SPG11-219ENST00000559822 TMEM14DPA8MWL7 114 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 ITGB1BP1O14713 200 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 RBBP9O75884 186 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 ARL6IP5O75915 188 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 NDUFA3O95167 84 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 UCHL1P09936 223 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 PSMA1P25786 263 aaKnown RBP9.57□□□□□ -0.88
SPG11-219ENST00000559822 PPIFP30405 207 aaKnown RBP9.57□□□□□ -0.88
SPG11-219ENST00000559822 MC5RP33032 325 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 UNC119Q13432 240 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms