RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CD1BP29016 333 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 ZNF134P52741 427 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 HLA-DRB3P79483 266 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 HTD2P86397 168 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 HMGN3Q15651 99 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 UBE2UQ5VVX9 321 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 STEAP3Q658P3 488 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 ZNF773Q6PK81 442 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 SLC35E3Q7Z769 313 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 FOXRED2Q8IWF2 684 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 IZUMO1Q8IYV9 350 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 OR4F17Q8NGA8 305 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 ST6GALNAC6Q969X2 333 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 OR4F4Q96R69 305 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 RASL11BQ9BPW5 248 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 CMSS1Q9BQ75 279 aaKnown RBP6.51□□□□□ -1.37
SNX1-207ENST00000559401 PECRQ9BY49 303 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 YTHDF1Q9BYJ9 559 aaKnown RBP6.51□□□□□ -1.37
SNX1-207ENST00000559401 RIMS4Q9H426 269 aaPredicted RBP6.51□□□□□ -1.37
SNX1-207ENST00000559401 SLC23A1Q9UHI7 598 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 LINC00527Q9UJ94 153 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 RAB22AQ9UL26 194 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 SSR3Q9UNL2 185 aa6.51□□□□□ -1.37
SNX1-207ENST00000559401 SAA2-SAA4A0A096LPE2 208 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 A0A0B4J203 849 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 TRAV1-2A0A0B4J238 106 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 SHISA3A0PJX4 238 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 IFITM5A6NNB3 132 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 WIPF1O43516 503 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 LANCL1O43813 399 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 YPEL1O60688 119 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 PF4P02776 101 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 SAA2P0DJI9 122 aaPredicted RBP6.5□□□□□ -1.37
SNX1-207ENST00000559401 SLC2A2P11168 524 aaPredicted RBP6.5□□□□□ -1.37
SNX1-207ENST00000559401 OR3A3P47888 321 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 ZNF137PP52743 207 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 SLC35B1P78383 322 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 PLA2G7Q13093 441 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 LSAMPQ13449 338 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 MMDQ15546 238 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 NEDD8Q15843 81 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 CD200R1LQ6Q8B3 271 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 C10orf99Q6UWK7 81 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 ZNF329Q86UD4 541 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 FAM89BQ8N5H3 189 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 CHPT1Q8WUD6 406 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 RAB3CQ96E17 227 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 RBMXL1Q96E39 390 aaKnown RBP6.5□□□□□ -1.37
SNX1-207ENST00000559401 NOL4LQ96MY1 436 aaPredicted RBP6.5□□□□□ -1.37
SNX1-207ENST00000559401 YPEL2Q96QA6 119 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 S1PR3Q99500 378 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 CHCHD6Q9BRQ6 235 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 MRPL20Q9BYC9 149 aaKnown RBP6.5□□□□□ -1.37
SNX1-207ENST00000559401 TXNL4BQ9NX01 149 aaKnown RBP6.5□□□□□ -1.37
SNX1-207ENST00000559401 HSF4Q9ULV5 492 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 MGAT4AQ9UM21 535 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 STUB1Q9UNE7 303 aa6.5□□□□□ -1.37
SNX1-207ENST00000559401 TSSC4Q9Y5U2 329 aaPredicted RBP6.5□□□□□ -1.37
SNX1-207ENST00000559401 TRBV6-6A0A0A6YYG2 114 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 LOC100506127A0A0U1RQW1 187 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 METTL21EPA6NDL7 271 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 FOXI3A8MTJ6 420 aaPredicted RBP6.49□□□□□ -1.37
SNX1-207ENST00000559401 NUDT19A8MXV4 375 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 KCNAB3O43448 404 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 SCTP09683 121 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 GALP22466 123 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 ZBTB25P24278 435 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 TALDO1P37837 337 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 CEACAM6P40199 344 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 GPR12P47775 334 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 TMEM50BP56557 158 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 CD83Q01151 205 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 MXD1Q05195 221 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 ARFRP1Q13795 201 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 EBI3Q14213 229 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 MOGAT2Q3SYC2 334 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 PLAC9Q5JTB6 97 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 ZNF880Q6PDB4 577 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 FAM131AQ6UXB0 335 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 Q6ZPA2 131 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 Q8N6K4 173 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 Q8N9W7 124 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 OR8H1Q8NGG4 311 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 OR10R2Q8NGX6 335 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 WIPF2Q8TF74 440 aaPredicted RBP6.49□□□□□ -1.37
SNX1-207ENST00000559401 EDARADDQ8WWZ3 215 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 NABP2Q9BQ15 211 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 ZNF251Q9BRH9 671 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 PARP12Q9H0J9 701 aaKnown RBP6.49□□□□□ -1.37
SNX1-207ENST00000559401 ATG5Q9H1Y0 275 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 OR51E2Q9H255 320 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 Q9N2K0 584 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 LIN7CQ9NUP9 197 aaKnown RBP6.49□□□□□ -1.37
SNX1-207ENST00000559401 PIPOXQ9P0Z9 390 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 OR1A1Q9P1Q5 309 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 DAPK2Q9UIK4 370 aa6.49□□□□□ -1.37
SNX1-207ENST00000559401 VWFP04275 2813 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 NOTOA8MTQ0 251 aa6.48□□□□□ -1.37
SNX1-207ENST00000559401 ADARB2-AS1A8MUL3 147 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms