RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 M0QYG6 137 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 NPFFO15130 113 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 LANCL1O43813 399 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 YPEL1O60688 119 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 RAB3DO95716 219 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 AVPP01185 164 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 IGHV1-69P01742 117 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 CD3DP04234 171 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 AKAIN1P0CW23 69 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 IGHV4-38-2P0DP08 117 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 NFYAP23511 347 aaPredicted RBP5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 CD40LGP29965 261 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 FCGR2CP31995 323 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 FAUP35544 74 aaKnown RBP5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 RFX2P48378 723 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 RAB7AP51149 207 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 PPP5CP53041 499 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 HERV-K104P61576 105 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 TSPAN5P62079 268 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 SCGB2A2Q13296 93 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 LSAMPQ13449 338 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 MEF2DQ14814 521 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 MORN2Q502X0 79 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 RUSC1-AS1Q66K80 236 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 ZNF626Q68DY1 528 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 STEAP1BQ6NZ63 245 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 BRD3OSQ6XYD6 125 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 C1orf229Q6ZS94 237 aaPredicted RBP5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 IL17RELQ6ZVW7 336 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 Q71RC1 249 aaPredicted RBP5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 TMEM17Q86X19 198 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 C8orf31Q8N9H6 132 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 BEND2Q8NDZ0 799 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 OR11H6Q8NGC7 330 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 TRIM63Q969Q1 353 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 CREB3L1Q96BA8 519 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 YPEL2Q96QA6 119 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 CCDC32Q9BV29 185 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 BEX2Q9BXY8 128 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 MS4A7Q9GZW8 240 aaPredicted RBP5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 MMP28Q9H239 520 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 GSX1Q9H4S2 264 aaPredicted RBP5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 NUP50Q9UKX7 468 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 NIPBLQ6KC79 2804 aaeCLIP5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 NAV3Q8IVL0 2385 aa5.38□□□□□ -1.55
CHRNA3-204ENST00000559002 LINC00854A0A1B0GVQ3 168 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ANKRD20A5PA0PJZ0 165 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 CENPXA8MT69 81 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ODF3BA8MYP8 253 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 LEUTXA8MZ59 168 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 J3QRK9 145 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ITGB1BP1O14713 200 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 SLC31A2O15432 143 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ST8SIA5O15466 376 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 CD74P04233 296 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 AMY2AP04746 511 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 IL7P13232 177 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 EPHA1P21709 976 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 HTR1DP28221 377 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 SAA4P35542 130 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 CEACAM3P40198 252 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 LUMP51884 338 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 FXYD4P59646 89 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 BPIFB3P59826 476 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 DYRK1AQ13627 763 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 BAK1Q16611 211 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 HLA-DRB5Q30154 266 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 SCGB2B2Q4G0G5 96 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 MIDNQ504T8 468 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 KIAA2026Q5HYC2 2103 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 KLF17Q5JT82 389 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 LY6G6FQ5SQ64 297 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 VAX1Q5SQQ9 334 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 UTF1Q5T230 341 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 MINOS1Q5TGZ0 78 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 HCP5Q6MZN7 132 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 FAM53AQ6NSI3 398 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 SLC25A48Q6ZT89 311 aaKnown RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 OVCH2Q7RTZ1 564 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 LYSMD2Q8IV50 215 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 H1FOOQ8IZA3 346 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 LYG1Q8N1E2 194 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ARRDC1Q8N5I2 433 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 LINC00311Q8N616 119 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ZNF439Q8NDP4 499 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 OR4P4Q8NGL7 312 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 OR4C16Q8NGL9 310 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 OR6F1Q8NGZ6 308 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 FAM216AQ8WUB2 273 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 GIMAP1Q8WWP7 306 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 DEDD2Q8WXF8 326 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 SDHCQ99643 169 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ZNF2Q9BSG1 426 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 TINAGL1Q9GZM7 467 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 TOLLIPQ9H0E2 274 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 PARP12Q9H0J9 701 aaKnown RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 C11orf54Q9H0W9 315 aaPredicted RBP5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 ABCB10Q9NRK6 738 aa5.37□□□□□ -1.55
CHRNA3-204ENST00000559002 MCUBQ9NWR8 336 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms