RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 LOXL3P58215 753 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 RPS27AP62979 156 aaKnown RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 DIAPH2-AS1Q14236 149 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 P2RY14Q15391 338 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 SYT6Q5T7P8 510 aaPredicted RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 HIST2H2BDQ6DRA6 164 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 CD200R1LQ6Q8B3 271 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 KLHDC1Q8N7A1 406 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR2T6Q8NHC8 308 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 TOMM40LQ969M1 308 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 SULT4A1Q9BR01 284 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 TM2D1Q9BX74 207 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 TMEM59Q9BXS4 323 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 NDUFB11Q9NX14 153 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 TRAPPC2LQ9UL33 140 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 AK6Q9Y3D8 172 aaKnown RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 AMMECR1Q9Y4X0 333 aaPredicted RBP4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 NOTCH3Q9UM47 2321 aa4.81□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM90A9PA6NNJ1 464 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 SLC17A2O00624 439 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 TIMM23O14925 209 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 SLC31A2O15432 143 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 MRPS14O60783 128 aaKnown RBP4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 CA11O75493 328 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 HBZP02008 142 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 RCC1P18754 421 aaPredicted RBP4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 BRS3P32247 399 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 RPS19P39019 145 aaKnown RBP4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 CLDN12P56749 244 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 BLCAPP62952 87 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 MADCAM1Q13477 382 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 TMEM95Q3KNT9 176 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 C6orf183Q5T699 404 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 UBE2UQ5VVX9 321 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 Q6ZPA2 131 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 SLC16A12Q6ZSM3 486 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 C6orf201Q7Z4U5 140 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 C5orf24Q7Z6I8 188 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 SPARTQ8N0X7 666 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF439Q8NDP4 499 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR52M1Q8NGK5 317 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR1L1Q8NH94 360 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 KCNG3Q8TAE7 436 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 MRPL30Q8TCC3 161 aaKnown RBP4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 WIPF2Q8TF74 440 aaPredicted RBP4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 RPEQ96AT9 228 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 CREB3L1Q96BA8 519 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 LPAR5Q9H1C0 372 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 Q9H521 79 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 PLGRKTQ9HBL7 147 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM30AQ9NZY2 134 aa4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 RRP15Q9Y3B9 282 aaKnown RBP4.8□□□□□ -1.64
CTDSPL2-204ENST00000558966 FOXI3A8MTJ6 420 aaPredicted RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 SDCBPO00560 298 aaPredicted RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 HSD17B6O14756 317 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 SOCS1O15524 211 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR2F2O95006 317 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 SNRNP70P08621 437 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 MNDAP41218 407 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 ARHGDIBP52566 201 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR10A3P58181 314 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 PLA2G7Q13093 441 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 GNMTQ14749 295 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 RAB11BQ15907 218 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 CCDC144NLQ6NUI1 221 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 C11orf88Q6PI97 169 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 C16orf82Q7Z2V1 217 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR2W3Q7Z3T1 314 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM89BQ8N5H3 189 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 LINC00311Q8N616 119 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 C11orf44Q8N8P7 122 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 C8orf31Q8N9H6 132 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR51D1Q8NGF3 324 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR10V1Q8NGI7 309 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR10X1Q8NGY0 326 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR56B4Q8NH76 319 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 RBM14Q96PK6 669 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 NEDD4LQ96PU5 975 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 SLC25A33Q9BSK2 321 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAAP24Q9BTP7 215 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 YTHDF1Q9BYJ9 559 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 PRSS22Q9GZN4 317 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 TAF9BQ9HBM6 251 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 PRKDCP78527 4128 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 TRAV1-2A0A0B4J238 106 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 TRDV1A0A1B0GX56 115 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 SH2D7A6NKC9 451 aaPredicted RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 M0QZ24 198 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 CCRL2O00421 344 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 LDLRAD4O15165 306 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 SPINT2O43291 252 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 NAPSAO96009 420 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 ARSBP15848 533 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 PSMB9P28065 219 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 BLVRBP30043 206 aaPredicted RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 REG1BP48304 166 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 RAB7AP51149 207 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF134P52741 427 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF137PP52743 207 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF816Q0VGE8 651 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms