RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TNFRSF1AP19438 455 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 PVALBP20472 110 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-211ENST00000558890 MPV17P39210 176 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 MDH2P40926 338 aaKnown RBP6.45□□□□□ -1.38
LRRC28-211ENST00000558890 FABP6P51161 128 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 HLA-DRB3P79483 266 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 PDCD1Q15116 288 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 MSMPQ1L6U9 139 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 SP6Q3SY56 376 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 SPIN3Q5JUX0 258 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 FIP1L1Q6UN15 594 aaKnown RBP6.45□□□□□ -1.38
LRRC28-211ENST00000558890 IL34Q6ZMJ4 242 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 CMTM1Q8IZ96 169 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 FAM58AQ8N1B3 248 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 LRRC75A-AS1Q8N1F1 130 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 BHLHE23Q8NDY6 225 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 OR1S2Q8NGQ3 325 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 TMED6Q8WW62 240 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 GTF3AQ92664 365 aaKnown RBP6.45□□□□□ -1.38
LRRC28-211ENST00000558890 RRNAD1Q96FB5 475 aaKnown RBP6.45□□□□□ -1.38
LRRC28-211ENST00000558890 C18orf12Q96KH6 178 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 TLNRD1Q9H1K6 362 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 BARX1Q9HBU1 254 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-211ENST00000558890 CYTL1Q9NRR1 136 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 MTCH1Q9NZJ7 389 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 FBXL17Q9UF56 701 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 PCDHB10Q9UN67 800 aa6.45□□□□□ -1.38
LRRC28-211ENST00000558890 UBE2J1Q9Y385 318 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-211ENST00000558890 TRBV6-6A0A0A6YYG2 114 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 C3orf85A0A1B0GTC6 90 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF705EA8MWA4 302 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-211ENST00000558890 LGALS8O00214 317 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 HSPB6O14558 160 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 DEGS1O15121 323 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 BET1O15155 118 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 MPPED1O15442 326 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 ST8SIA3O43173 380 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 KCNAB3O43448 404 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 CDS2O95674 445 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 NAPSAO96009 420 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF44P15621 663 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 CA6P23280 308 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 P2RY1P47900 373 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 BLOC1S1P78537 153 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 GNMTQ14749 295 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 GPR157Q5UAW9 335 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 TMEM268Q5VZI3 342 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 OR2T2Q6IF00 324 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF695Q8IW36 515 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 SUMF2Q8NBJ7 301 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 OR4A4PQ8NGN8 299 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 OR10Z1Q8NGY1 313 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 Q8TCH9 128 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 SECTM1Q8WVN6 248 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 SAT2Q96F10 170 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-211ENST00000558890 ABHD14BQ96IU4 210 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 KIRREL1Q96J84 757 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 ADAT1Q9BUB4 502 aaKnown RBP6.44□□□□□ -1.38
LRRC28-211ENST00000558890 EGLN1Q9GZT9 426 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 RAB1BQ9H0U4 201 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 OR51I2Q9H344 312 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 IFT22Q9H7X7 185 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 SEBOXQ9HB31 216 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-211ENST00000558890 TAF9BQ9HBM6 251 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 MMP26Q9NRE1 261 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 BEX4Q9NWD9 120 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-211ENST00000558890 POMT1Q9Y6A1 747 aa6.44□□□□□ -1.38
LRRC28-211ENST00000558890 NIPBLQ6KC79 2804 aaeCLIP6.44□□□□□ -1.38
LRRC28-211ENST00000558890 MED6O75586 246 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF205O95201 554 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 APOC3P02656 99 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 MBPP02686 304 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-211ENST00000558890 ERVS71-1P61550 626 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 VAMP2P63027 116 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 DEFA5Q01523 94 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 PJVKQ0ZLH3 352 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 OR8G1Q15617 311 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 LINC01559Q495D7 138 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 IGSF11Q5DX21 431 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 SPATA46Q5T0L3 261 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 SHEQ5VZ18 495 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 RPL7L1Q6DKI1 246 aaKnown RBP6.43□□□□□ -1.38
LRRC28-211ENST00000558890 ALKBH2Q6NS38 261 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 SPNS3Q6ZMD2 512 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 LYZL2Q7Z4W2 148 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 TBC1D26Q86UD7 250 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 FAM90A1Q86YD7 464 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 SLC35G3Q8N808 338 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 BPIFCQ8NFQ6 507 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 OR11L1Q8NGX0 322 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 MRPL30Q8TCC3 161 aaKnown RBP6.43□□□□□ -1.38
LRRC28-211ENST00000558890 IL22RA2Q969J5 263 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 MSI2Q96DH6 328 aaKnown RBP6.43□□□□□ -1.38
LRRC28-211ENST00000558890 FOXC2Q99958 501 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 TMEM222Q9H0R3 208 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 DYNLRB1Q9NP97 96 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 TAAR3PQ9P1P4 343 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 IL36RNQ9UBH0 155 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 LPAR3Q9UBY5 353 aa6.43□□□□□ -1.38
LRRC28-211ENST00000558890 DUSP13Q9UII6 198 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms