RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 LRRC42Q9Y546 428 aa12.14□□□□□ -0.47
RPL28-207ENST00000558815 A0A0B4J203 849 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 TRAV1-2A0A0B4J238 106 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 YPEL1O60688 119 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 MOSP00540 346 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 OPN1MWP04001 364 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 OPN1MW2P0DN77 364 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 OPN1MW3P0DN78 364 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 PF4V1P10720 104 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 RAB3BP20337 219 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 CD1BP29016 333 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 ZNF137PP52743 207 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 TMEM50BP56557 158 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 EBI3Q14213 229 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 TCTEX1D4Q5JR98 221 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 UBE2UQ5VVX9 321 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 CD200R1LQ6Q8B3 271 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 FAM89BQ8N5H3 189 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 YPEL2Q96QA6 119 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
RPL28-207ENST00000558815 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
RPL28-207ENST00000558815 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
RPL28-207ENST00000558815 A0A075B6Q4 140 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 FOXI3A8MTJ6 420 aaPredicted RBP12.12□□□□□ -0.47
RPL28-207ENST00000558815 G3V4G9 280 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 LANCL1O43813 399 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 RANBP1P43487 201 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 OR3A3P47888 321 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 CD83Q01151 205 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 LSAMPQ13449 338 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 STEAP3Q658P3 488 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 ZNF880Q6PDB4 577 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 FCGR1BQ92637 280 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 MRPL20Q9BYC9 149 aaKnown RBP12.12□□□□□ -0.47
RPL28-207ENST00000558815 YTHDF1Q9BYJ9 559 aaKnown RBP12.12□□□□□ -0.47
RPL28-207ENST00000558815 RIMS4Q9H426 269 aaPredicted RBP12.12□□□□□ -0.47
RPL28-207ENST00000558815 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 SLC23A1Q9UHI7 598 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 RAB22AQ9UL26 194 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 HSF4Q9ULV5 492 aa12.12□□□□□ -0.47
RPL28-207ENST00000558815 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 IFITM5A6NNB3 132 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 LDLRAD4O15165 306 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 HSPA12AO43301 675 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
RPL28-207ENST00000558815 SLC2A2P11168 524 aaPredicted RBP12.11□□□□□ -0.47
RPL28-207ENST00000558815 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
RPL28-207ENST00000558815 NEDD8Q15843 81 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 MOGAT2Q3SYC2 334 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 PLAC9Q5JTB6 97 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 ZNF773Q6PK81 442 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 FOXRED2Q8IWF2 684 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 Q8N6K4 173 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 Q8N9W7 124 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
RPL28-207ENST00000558815 TXNL4BQ9NX01 149 aaKnown RBP12.11□□□□□ -0.47
RPL28-207ENST00000558815 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
RPL28-207ENST00000558815 TSSC4Q9Y5U2 329 aaPredicted RBP12.11□□□□□ -0.47
RPL28-207ENST00000558815 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 SCTP09683 121 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 CD3GP09693 182 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 F2RL1P55085 397 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 CHPT1Q8WUD6 406 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 RAB3CQ96E17 227 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 ABHD14BQ96IU4 210 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 S1PR3Q99500 378 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 OR51E2Q9H255 320 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 Q9N2K0 584 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 LIN7CQ9NUP9 197 aaKnown RBP12.1□□□□□ -0.47
RPL28-207ENST00000558815 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 SSR3Q9UNL2 185 aa12.1□□□□□ -0.47
RPL28-207ENST00000558815 TRBV6-6A0A0A6YYG2 114 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 IGHG2P01859 326 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 PF4P02776 101 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 GNB3P16520 340 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 GALP22466 123 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 GADD45AP24522 165 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 CEACAM6P40199 344 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 GPR12P47775 334 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 SLC35B1P78383 322 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 MMDQ15546 238 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 PDLIM3Q53GG5 364 aaPredicted RBP12.09□□□□□ -0.47
RPL28-207ENST00000558815 RPL39P5Q59GN2 51 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 LY6G6FQ5SQ64 297 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 ZNF833PQ6ZTB9 187 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 NR2C2APQ86WQ0 139 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 STPG2Q8N412 459 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 OR10R2Q8NGX6 335 aa12.09□□□□□ -0.47
RPL28-207ENST00000558815 ATG5Q9H1Y0 275 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms