RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 IFNA2P01563 188 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 RCVRNP35243 200 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 PPP1CCP36873 323 aaKnown RBP8.5□□□□□ -1.05
LRRC28-204ENST00000558172 GNG10P50151 68 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 RAB7AP51149 207 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 TAS2R46P59540 309 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 ACTBP60709 375 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 ACTG1P63261 375 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 MADCAM1Q13477 382 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 HERPUD1Q15011 391 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 IGSF11Q5DX21 431 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 CT45A1Q5HYN5 189 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 BCL6BQ8N143 479 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF439Q8NDP4 499 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 OR2AK2Q8NG84 335 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 OR5AP2Q8NGF4 316 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 OR10X1Q8NGY0 326 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 OR52I2Q8NH67 350 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 CT45A3Q8NHU0 189 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF418Q8TF45 676 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-204ENST00000558172 GCDHQ92947 438 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-204ENST00000558172 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 OCEL1Q9H607 264 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 NECAP2Q9NVZ3 263 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 PTTG2Q9NZH5 202 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 MTFP1Q9UDX5 166 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 JMJD1CQ15652 2540 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 A0A0A6YYJ9 748 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 A0A0U1RQK1 487 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 GSTZ1O43708 216 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-204ENST00000558172 IGHV3-7P01780 117 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 OR3A3P47888 321 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 ARHGDIBP52566 201 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF134P52741 427 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF45Q02386 682 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 GNMTQ14749 295 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 CDK10Q15131 360 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 AANATQ16613 207 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 DEFB112Q30KQ8 113 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 ACTBL2Q562R1 376 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 UTF1Q5T230 341 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 CCDC144NLQ6NUI1 221 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 LHFPL4Q7Z7J7 247 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 LDLRAD3Q86YD5 345 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 SMIM4Q8WVI0 70 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 C22orf15Q8WYQ4 148 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 SNAPC3Q92966 411 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 JMJD8Q96S16 334 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 SLC6A7Q99884 636 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 RDH8Q9NYR8 311 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 TAS2R8Q9NYW2 309 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 PIPOXQ9P0Z9 390 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 OR1A1Q9P1Q5 309 aa8.49□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF107Q9UII5 783 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-204ENST00000558172 A0A1W2PPE3 182 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 LY6LH3BQJ8 138 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 RAB29O14966 203 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 SLC31A2O15432 143 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 TXNL1O43396 289 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 GAPDHP04406 335 aaKnown RBP8.48□□□□□ -1.05
LRRC28-204ENST00000558172 TBPP20226 339 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF137PP52743 207 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 DGCR2P98153 550 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 SSX2Q16385 188 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 PYDC2Q56P42 97 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 TPTE2P1Q5T6R2 138 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 FAM53AQ6NSI3 398 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-204ENST00000558172 Q6YL49 198 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 OVCH2Q7RTZ1 564 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 LYSMD2Q8IV50 215 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 H1FOOQ8IZA3 346 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-204ENST00000558172 LYG1Q8N1E2 194 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 TMEM229BQ8NBD8 167 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 OR5H2Q8NGV7 314 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 RPEQ96AT9 228 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 AJUBAQ96IF1 538 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 C11orf54Q9H0W9 315 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-204ENST00000558172 KLK11Q9UBX7 282 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 GAB2Q9UQC2 676 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 RBMX2Q9Y388 322 aaKnown RBP8.48□□□□□ -1.05
LRRC28-204ENST00000558172 V9GYH0 126 aa8.48□□□□□ -1.05
LRRC28-204ENST00000558172 ZFHX3Q15911 3703 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF736B4DX44 427 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-204ENST00000558172 TCF21O43680 179 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 SLC22A5O76082 557 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 FCER2P06734 321 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 CSF1P09603 554 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 OR5H8P0DN80 308 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 HLA-DMAP28067 261 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 BRS3P32247 399 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 DYNLT3P51808 116 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 TAS2R19P59542 299 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 ZNF816Q0VGE8 651 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-204ENST00000558172 DYRK1AQ13627 763 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 RNASE12Q5GAN4 147 aaKnown RBP8.47□□□□□ -1.05
LRRC28-204ENST00000558172 LDLRAD2Q5SZI1 272 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 FAM71F2Q6NXP2 309 aa8.47□□□□□ -1.05
LRRC28-204ENST00000558172 DHRS11Q6UWP2 260 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms