RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ABCA11PQ4W5N1 156 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 METTL11BQ5VVY1 283 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 TMED4Q7Z7H5 227 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 C11orf42Q8N5U0 333 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 OR8U1Q8NH10 309 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 DACT3Q96B18 629 aaPredicted RBP13.83□□□□□ -0.2
SNX1-203ENST00000558040 ABHD14AQ9BUJ0 271 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 RSRP1Q9BUV0 290 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 TMEM133Q9H2Q1 129 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 LPAR2Q9HBW0 351 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 KCNS2Q9ULS6 477 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 FLVCR2Q9UPI3 526 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 ANKRD17O75179 2603 aaKnown RBP13.82□□□□□ -0.2
SNX1-203ENST00000558040 IGKV1D-13A0A0B4J2D9 117 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 PRAF2O60831 178 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 IGKV1-13P0DP09 117 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 MECP2P51608 486 aaKnown RBP13.82□□□□□ -0.2
SNX1-203ENST00000558040 DVL1P1P54792 670 aaPredicted RBP13.82□□□□□ -0.2
SNX1-203ENST00000558040 Q6ZNX1 250 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 CMTM1Q8IZ96 169 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 C8orf31Q8N9H6 132 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 CCDC71LQ8N9Z2 235 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 PARP12Q9H0J9 701 aaKnown RBP13.82□□□□□ -0.2
SNX1-203ENST00000558040 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 PSG11Q9UQ72 335 aa13.82□□□□□ -0.2
SNX1-203ENST00000558040 TRAV20A0A0B4J274 112 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 GPR31O00270 319 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 PRTN3P24158 256 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 CD34P28906 385 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 GNG10P50151 68 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 RAB25P57735 213 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 UBE2MP61081 183 aaKnown RBP13.81□□□□□ -0.2
SNX1-203ENST00000558040 MSMO1Q15800 293 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 FAM53AQ6NSI3 398 aaPredicted RBP13.81□□□□□ -0.2
SNX1-203ENST00000558040 FAHD2BQ6P2I3 314 aaPredicted RBP13.81□□□□□ -0.2
SNX1-203ENST00000558040 C11orf88Q6PI97 169 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 ZNF645Q8N7E2 425 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 LINC01356Q8N9X3 169 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 ZNF439Q8NDP4 499 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 OR13D1Q8NGV5 346 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 OR9G1Q8NH87 305 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 LEAP2Q969E1 77 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 FAHD2AQ96GK7 314 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 AKR1E2Q96JD6 320 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 ALX4Q9H161 411 aaPredicted RBP13.81□□□□□ -0.2
SNX1-203ENST00000558040 OR2D2Q9H210 308 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 GHITMQ9H3K2 345 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 HEXA-AS1Q9H8Q6 139 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 MMP26Q9NRE1 261 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 ZNF221Q9UK13 617 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 INSIG2Q9Y5U4 225 aa13.81□□□□□ -0.2
SNX1-203ENST00000558040 CELSR2Q9HCU4 2923 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 YLPM1P49750 1951 aaKnown RBP13.8□□□□□ -0.2
SNX1-203ENST00000558040 NAV2Q8IVL1 2488 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 TOR1AO14656 332 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 HSD17B6O14756 317 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 IGHV3-7P01780 117 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 PI3P19957 117 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 ANXA7P20073 488 aaKnown RBP13.8□□□□□ -0.2
SNX1-203ENST00000558040 GATA3P23771 443 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 GNRHRP30968 328 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 GPR12P47775 334 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 SLC25A48Q6ZT89 311 aaKnown RBP13.8□□□□□ -0.2
SNX1-203ENST00000558040 SLC25A42Q86VD7 318 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 ABHD12Q8N2K0 398 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 Q8N7P7 452 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 ZBTB34Q8NCN2 500 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 AGMATQ9BSE5 352 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 RTBDNQ9BSG5 229 aaPredicted RBP13.8□□□□□ -0.2
SNX1-203ENST00000558040 CLEC7AQ9BXN2 247 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 UNKLQ9H9P5 680 aaKnown RBP13.8□□□□□ -0.2
SNX1-203ENST00000558040 GPN1Q9HCN4 374 aaPredicted RBP13.8□□□□□ -0.2
SNX1-203ENST00000558040 CCL28Q9NRJ3 127 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 SLC2A9Q9NRM0 540 aa13.8□□□□□ -0.2
SNX1-203ENST00000558040 ABCA12Q86UK0 2595 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 IGHV2-26A0A0B4J1V2 119 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 J3QR06 171 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 TOX4O94842 621 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 IL5P05113 134 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 AKR1C4P17516 323 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 GZMKP49863 264 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 PRRX1P54821 245 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 PIGPP57054 158 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 RND3P61587 244 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 TATDN3Q17R31 274 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 C4orf46Q504U0 113 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 PHLDA2Q53GA4 152 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 TMEM128Q5BJH2 165 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 CT45A1Q5HYN5 189 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 DCAF12L2Q5VW00 463 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 NCR3LG1Q68D85 454 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 ZNF818PQ6ZRF7 136 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 VMO1Q7Z5L0 202 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.79□□□□□ -0.2
SNX1-203ENST00000558040 BVESQ8NE79 360 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 WFDC11Q8NEX6 87 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 CT45A3Q8NHU0 189 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms