RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZBTB25P24278 435 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 LY6G6FQ5SQ64 297 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 OR1A1Q9P1Q5 309 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 CEACAM6P40199 344 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 KRTAP21-3Q3LHN1 58 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 KRTAP24-1Q3LI83 254 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 C16orf87Q6PH81 154 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 FAM216AQ8WUB2 273 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 TOMM40LQ969M1 308 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 RPEQ96AT9 228 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 ABCB10Q9NRK6 738 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 FBN1P35555 2871 aaKnown RBP20.61■□□□□ 0.89
SMAD6-202ENST00000557916 IGKV1D-8A0A087WSZ0 117 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 OOSP1A8MZH6 123 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 CTDSP2O14595 271 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 RGS5O15539 181 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 IL3RAP26951 378 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 RAB13P51153 203 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 HERPUD1Q15011 391 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 IGSF11Q5DX21 431 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 OR2AK2Q8NG84 335 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 TMEM158Q8WZ71 300 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 ABHD14AQ9BUJ0 271 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 VPREB3Q9UKI3 123 aa20.61■□□□□ 0.89
SMAD6-202ENST00000557916 MRPS7Q9Y2R9 242 aaKnown RBP20.61■□□□□ 0.89
SMAD6-202ENST00000557916 BET1O15155 118 aa20.6■□□□□ 0.89
SMAD6-202ENST00000557916 DYNLT3P51808 116 aa20.6■□□□□ 0.89
SMAD6-202ENST00000557916 ARHGDIBP52566 201 aa20.6■□□□□ 0.89
SMAD6-202ENST00000557916 CCDC144NLQ6NUI1 221 aa20.6■□□□□ 0.89
SMAD6-202ENST00000557916 PIFOQ8TCI5 191 aa20.6■□□□□ 0.89
SMAD6-202ENST00000557916 CABLES2Q9BTV7 478 aa20.6■□□□□ 0.89
SMAD6-202ENST00000557916 SLIRPQ9GZT3 109 aaKnown RBP20.6■□□□□ 0.89
SMAD6-202ENST00000557916 HLA-DQB1P01920 261 aa20.59■□□□□ 0.89
SMAD6-202ENST00000557916 DIAPH2-AS1Q14236 149 aa20.59■□□□□ 0.89
SMAD6-202ENST00000557916 MIXL1Q9H2W2 232 aa20.59■□□□□ 0.89
SMAD6-202ENST00000557916 NDUFA13Q9P0J0 144 aa20.59■□□□□ 0.89
SMAD6-202ENST00000557916 HSD17B6O14756 317 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 DIRAS3O95661 229 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 CBX5P45973 191 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 RAB7AP51149 207 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 LY6EQ16553 131 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 LYG1Q8N1E2 194 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 GVQW1Q8N7I0 195 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.58■□□□□ 0.88
SMAD6-202ENST00000557916 OR10J5Q8NHC4 309 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 DCUN1D5Q9BTE7 237 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 C6orf62Q9GZU0 229 aaPredicted RBP20.58■□□□□ 0.88
SMAD6-202ENST00000557916 PARP12Q9H0J9 701 aaKnown RBP20.58■□□□□ 0.88
SMAD6-202ENST00000557916 EXTL2Q9UBQ6 330 aa20.58■□□□□ 0.88
SMAD6-202ENST00000557916 TRBV6-7A0A0A0MS04 114 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 DPPA5A6NC42 116 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 RNF212BA8MTL3 300 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 GAPDHP04406 335 aaKnown RBP20.57■□□□□ 0.88
SMAD6-202ENST00000557916 BRS3P32247 399 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 PRSS3P35030 304 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 HOGA1Q86XE5 327 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 LAX1Q8IWV1 398 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 EDARADDQ8WWZ3 215 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 GCDHQ92947 438 aaPredicted RBP20.57■□□□□ 0.88
SMAD6-202ENST00000557916 ST6GALNAC6Q969X2 333 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 RDH8Q9NYR8 311 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 ANXA10Q9UJ72 324 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 ADAM30Q9UKF2 790 aa20.57■□□□□ 0.88
SMAD6-202ENST00000557916 MEIS3P1A6NDR6 274 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 FAM181BA6NEQ2 426 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 ITGB1BP1O14713 200 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 ST8SIA5O15466 376 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 GPR137BO60478 399 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 REG1BP48304 166 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 ZNF137PP52743 207 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 ZNF816Q0VGE8 651 aaPredicted RBP20.56■□□□□ 0.88
SMAD6-202ENST00000557916 SNX29P2Q8IUI4 249 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 BEST4Q8NFU0 473 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 MCFD2Q8NI22 146 aa20.56■□□□□ 0.88
SMAD6-202ENST00000557916 DGCR14Q96DF8 476 aaKnown RBP20.56■□□□□ 0.88
SMAD6-202ENST00000557916 C11orf54Q9H0W9 315 aaPredicted RBP20.56■□□□□ 0.88
SMAD6-202ENST00000557916 CNIH2Q6PI25 160 aa20.55■□□□□ 0.88
SMAD6-202ENST00000557916 OR8H3Q8N146 312 aa20.55■□□□□ 0.88
SMAD6-202ENST00000557916 GINS4Q9BRT9 223 aa20.55■□□□□ 0.88
SMAD6-202ENST00000557916 C19orf24Q9BVV8 132 aa20.55■□□□□ 0.88
SMAD6-202ENST00000557916 NXF2Q9GZY0 626 aaKnown RBP20.55■□□□□ 0.88
SMAD6-202ENST00000557916 TOLLIPQ9H0E2 274 aa20.55■□□□□ 0.88
SMAD6-202ENST00000557916 IFI27L2Q9H2X8 130 aa20.55■□□□□ 0.88
SMAD6-202ENST00000557916 TCF19Q9Y242 345 aa20.55■□□□□ 0.88
SMAD6-202ENST00000557916 A0A1W2PPI3 338 aa20.54■□□□□ 0.88
SMAD6-202ENST00000557916 TIMM23O14925 209 aa20.54■□□□□ 0.88
SMAD6-202ENST00000557916 FCER2P06734 321 aa20.54■□□□□ 0.88
SMAD6-202ENST00000557916 CTXN2P0C2S0 81 aa20.54■□□□□ 0.88
SMAD6-202ENST00000557916 RTN4IP1Q8WWV3 396 aaPredicted RBP20.54■□□□□ 0.88
SMAD6-202ENST00000557916 IFT46Q9NQC8 304 aa20.54■□□□□ 0.88
SMAD6-202ENST00000557916 LPLP06858 475 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 CD24P25063 80 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 TGIF2LXQ8IUE1 241 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 ODF3L1Q8IXM7 274 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 DRAM1Q8N682 238 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 MDFIQ99750 246 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 AGMATQ9BSE5 352 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 PITPNC1Q9UKF7 332 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 IGHV1-3A0A0C4DH29 117 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 LANCL1O43813 399 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms