RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KLHL12Q53G59 568 aa2.53□□□□□ -2
TDP1-217ENST00000557782 PYCR3Q53H96 274 aa2.53□□□□□ -2
TDP1-217ENST00000557782 ZNF678Q5SXM1 525 aa2.53□□□□□ -2
TDP1-217ENST00000557782 TRIQKQ629K1 86 aa2.53□□□□□ -2
TDP1-217ENST00000557782 FAM71E1Q6IPT2 247 aa2.53□□□□□ -2
TDP1-217ENST00000557782 LAIR2Q6ISS4 152 aa2.53□□□□□ -2
TDP1-217ENST00000557782 EBLN2Q6P2I7 272 aa2.53□□□□□ -2
TDP1-217ENST00000557782 SLC36A1Q7Z2H8 476 aa2.53□□□□□ -2
TDP1-217ENST00000557782 LYG2Q86SG7 212 aa2.53□□□□□ -2
TDP1-217ENST00000557782 ZNF567Q8N184 647 aa2.53□□□□□ -2
TDP1-217ENST00000557782 OR2D3Q8NGH3 330 aa2.53□□□□□ -2
TDP1-217ENST00000557782 MCFD2Q8NI22 146 aa2.53□□□□□ -2
TDP1-217ENST00000557782 BORCS7Q96B45 105 aa2.53□□□□□ -2
TDP1-217ENST00000557782 ABHD14BQ96IU4 210 aa2.53□□□□□ -2
TDP1-217ENST00000557782 ULBP3Q9BZM4 244 aa2.53□□□□□ -2
TDP1-217ENST00000557782 TRABDQ9H4I3 376 aa2.53□□□□□ -2
TDP1-217ENST00000557782 TMEM38BQ9NVV0 291 aa2.53□□□□□ -2
TDP1-217ENST00000557782 RPS6KB2Q9UBS0 482 aa2.53□□□□□ -2
TDP1-217ENST00000557782 DNAJC12Q9UKB3 198 aa2.53□□□□□ -2
TDP1-217ENST00000557782 PCYT1BQ9Y5K3 369 aaPredicted RBP2.53□□□□□ -2
TDP1-217ENST00000557782 PCF11O94913 1555 aaKnown RBP2.53□□□□□ -2.01
TDP1-217ENST00000557782 ZCCHC6Q5VYS8 1495 aaKnown RBP2.52□□□□□ -2.01
TDP1-217ENST00000557782 CCDC144AA2RUR9 1427 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 PTPRTO14522 1441 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 C2orf74A8MZ97 194 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 ZNF878C9JN71 531 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 MRASO14807 208 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 DEDDO75618 318 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 OR7C1O76099 320 aaPredicted RBP2.52□□□□□ -2.01
TDP1-217ENST00000557782 LTAP01374 205 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 CD28P10747 220 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 MAP2K4P45985 399 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 GZMMP51124 257 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 MMDQ15546 238 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 FAM201AQ5SY85 155 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 C1orf194Q5T5A4 169 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 FAM104BQ5XKR9 115 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 NANOGP8Q6NSW7 305 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 GLT6D1Q7Z4J2 308 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 LINC00612Q8N6U2 182 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 YIPF7Q8N8F6 280 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 CYB561D1Q8N8Q1 229 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 ZNF680Q8NEM1 530 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 OR8S1Q8NH09 359 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 RBMXL1Q96E39 390 aaKnown RBP2.52□□□□□ -2.01
TDP1-217ENST00000557782 L3HYPDHQ96EM0 354 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 OR2V2Q96R30 315 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 TMEM109Q9BVC6 243 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 MED28Q9H204 178 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 C11orf49Q9H6J7 331 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 PDFQ9HBH1 243 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 ZNF331Q9NQX6 463 aaPredicted RBP2.52□□□□□ -2.01
TDP1-217ENST00000557782 ARMC1Q9NVT9 282 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 RWDD2AQ9UIY3 292 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 HHLA2Q9UM44 414 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 WASHC3Q9Y3C0 194 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 FAM32AQ9Y421 112 aaKnown RBP2.52□□□□□ -2.01
TDP1-217ENST00000557782 KIF25-AS1Q9Y6Z4 181 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 ARAP3Q8WWN8 1544 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 KIAA1671Q9BY89 1806 aa2.52□□□□□ -2.01
TDP1-217ENST00000557782 DOCK9Q9BZ29 2069 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 AHDC1Q5TGY3 1603 aaPredicted RBP2.51□□□□□ -2.01
TDP1-217ENST00000557782 ZNF318Q5VUA4 2279 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 TICRRQ7Z2Z1 1910 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 IZUMO1RA6ND01 250 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 C15orf65H3BRN8 121 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 K7ERS5 55 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 BHLHE40O14503 412 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 ZNF207O43670 478 aaKnown RBP2.51□□□□□ -2.01
TDP1-217ENST00000557782 KLRC4O43908 158 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 CCNE2O96020 404 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 MT-CO2P00403 227 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 IGKV3-15P01624 115 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 IGHV1-46P01743 117 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 TTRP02766 147 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 ADRA2AP08913 450 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 PTHLHP12272 177 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 CA7P43166 264 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 ELF3P78545 371 aaPredicted RBP2.51□□□□□ -2.01
TDP1-217ENST00000557782 PSG4Q00888 419 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 RNF212Q495C1 297 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 HES3Q5TGS1 186 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 SBSNQ6UWP8 590 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 C5orf46Q6UWT4 87 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 TIFABQ6ZNK6 161 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 Q6ZR03 302 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 TAC4Q86UU9 113 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 KRTAP1-3Q8IUG1 177 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 LYG1Q8N1E2 194 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 DEFB125Q8N687 156 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 FER1L6-AS1Q8NA97 138 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 OR4X1Q8NH49 305 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 RAD51AP1Q96B01 352 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 SLC25A44Q96H78 314 aaPredicted RBP2.51□□□□□ -2.01
TDP1-217ENST00000557782 SFRP2Q96HF1 295 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 PEBP4Q96S96 227 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 ENY2Q9NPA8 101 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 RPS10P5Q9NQ39 176 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 TAS2R1Q9NYW7 299 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms