RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 STRADBQ9C0K7 418 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 SMOC1Q9H4F8 434 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 LIN7CQ9NUP9 197 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 PPP1R3CQ9UQK1 317 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 NPIPB11E5RHQ5 1161 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 TMEM250H0YL14 139 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 CCL2P13500 99 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF16P17020 682 aaPredicted RBP10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 PSMB3P49720 205 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 OR51G1Q8NGK1 321 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 SAP25Q8TEE9 199 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 RPUSD4Q96CM3 377 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 ACY3Q96HD9 319 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF488Q96MN9 340 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 TMEM9BQ9NQ34 198 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 OR1A1Q9P1Q5 309 aa10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 RBM7Q9Y580 266 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-211ENST00000557658 A0A096LPE4 126 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 A0A1W2PPZ6 126 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 LRRC3CA6NJW4 275 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNHIT1O43257 154 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 COX5BP10606 129 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 FOLR3P41439 243 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 RPL23P62829 140 aaKnown RBP10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF66Q6ZN08 573 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 CENPVQ7Z7K6 275 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 FAM58AQ8N1B3 248 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 RAB24Q969Q5 203 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF552Q9H707 407 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 DLL3Q9NYJ7 618 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 A8MWP6 167 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 FAM90A26D6RGX4 464 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 GCGP01275 180 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 IGLV2-14P01704 120 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 NDUFB7P17568 137 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 ERVS71-1P61550 626 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 SSX2Q16385 188 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 C9orf135Q5VTT2 229 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF573Q86YE8 665 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 RPP25LQ8N5L8 163 aaKnown RBP10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 OR1K1Q8NGR3 316 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 OR5P3Q8WZ94 311 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 KCNS2Q9ULS6 477 aa10.03□□□□□ -0.8
VIPAS39-211ENST00000557658 ANKRD30BLA7E2S9 258 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 HRASP01112 189 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 GDF1P27539 372 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 TESK1Q15569 626 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF585BQ52M93 769 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 MOB1BQ7L9L4 216 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 ANAPC16Q96DE5 110 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 PRDM6Q9NQX0 595 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 RYDENQ9NUL5 291 aaKnown RBP10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 MRPS18CQ9Y3D5 142 aaKnown RBP10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 FREM1Q5H8C1 2179 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 CTXND1A0A1B0GTU2 59 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 IGKV1D-33P01593 117 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 IGKV1-33P01594 117 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 GZMHP20718 246 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 CEACAM6P40199 344 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 IDH3GP51553 393 aaPredicted RBP10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 GNG3P63215 75 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 OR8G2PQ6IF36 304 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 TMEM14EPQ6UXP3 125 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF664Q8N3J9 261 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 IFI44Q8TCB0 444 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 TMEM170AQ8WVE7 144 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 NDUFAF3Q9BU61 184 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 PRRG4Q9BZD6 226 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 PARLQ9H300 379 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 OR51I2Q9H344 312 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF576Q9H609 170 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 MANBALQ9NQG1 85 aa10.02□□□□□ -0.81
VIPAS39-211ENST00000557658 IGKV3D-15A0A087WSY6 115 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 OR5B21A6NL26 309 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 ZNF705GA8MUZ8 300 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 SS18L1O75177 396 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 CLDN1O95832 211 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 NGFP01138 241 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 MBP02144 154 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 APLNRP35414 380 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 PDLIM4P50479 330 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 P2RY6Q15077 328 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 BEND2Q8NDZ0 799 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 MISP3Q96FF7 219 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 PCGF1Q9BSM1 259 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 TP53TG5Q9Y2B4 290 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 MPC1Q9Y5U8 109 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 A0A1W2PPQ1 181 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 CCL4P13236 92 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 SELLP14151 372 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 HOXA6P31267 233 aa10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 USF2Q15853 346 aaPredicted RBP10.01□□□□□ -0.81
VIPAS39-211ENST00000557658 ATP6V1FQ16864 119 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms