RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 PSG7Q13046 419 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 NAB1Q13506 487 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 IRF4Q15306 451 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 ZNHIT3Q15649 155 aaPredicted RBP3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 CDNFQ49AH0 187 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 TTC32Q5I0X7 151 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 RBM48Q5RL73 367 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 HHATQ5VTY9 493 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 ZNF720Q7Z2F6 126 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 C12orf56Q8IXR9 622 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 GAPTQ8N292 157 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 RPP25LQ8N5L8 163 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 NECAP1Q8NC96 275 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 OR13G1Q8NGZ3 307 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 OR51Q1Q8NH59 317 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 WFDC5Q8TCV5 224 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 PTX4Q96A99 478 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 FLYWCH2Q96CP2 140 aaKnown RBP3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 RBBP8Q99708 897 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 PYGO2Q9BRQ0 406 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 DCUN1D5Q9BTE7 237 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 EMC6Q9BV81 110 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 SAMD10Q9BYL1 202 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 DSN1Q9H410 356 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 NOX3Q9HBY0 568 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 SLC40A1Q9NP59 571 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 USH1CQ9Y6N9 552 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 FAT1Q14517 4588 aa3.31□□□□□ -1.88
MTHFD1-216ENST00000557539 IGLV3-10A0A075B6K4 115 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 IGHV5-51A0A0C4DH38 117 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 A0A1B0GX12 115 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 C5orf63A6NC05 138 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 SERPINB7O75635 380 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 RP2O75695 350 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 SLC22A5O76082 557 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 RPA3P35244 121 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 RPS10P46783 165 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 RAB38P57729 211 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 RAP1AP62834 184 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 UBE2IP63279 158 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 CD164Q04900 197 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 RSBN1Q5VWQ0 802 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 PTRHD1Q6GMV3 140 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 OPN5Q6U736 354 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 FAM92BQ6ZTR7 304 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 LINC00612Q8N6U2 182 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 OR4K17Q8NGC6 315 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 BLOC1S5Q8TDH9 187 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 GHSRQ92847 366 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 TMED9Q9BVK6 235 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 SFXN3Q9BWM7 321 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 SLC25A39Q9BZJ4 359 aaPredicted RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 NXF2Q9GZY0 626 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 ASB7Q9H672 318 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 WDR54Q9H977 334 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 C12orf4Q9NQ89 552 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 IMP3Q9NV31 184 aaKnown RBP3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 SCN1AP35498 2009 aa3.3□□□□□ -1.88
MTHFD1-216ENST00000557539 DNAH2Q9P225 4427 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 IGHV3-64DA0A0J9YX35 117 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 KIR2DS1A0A191URI9 304 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 PVALEFA0A1B0GWK0 134 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 GOLGA6L10A6NI86 522 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 ZNF705GA8MUZ8 300 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 KRBOX1C9JBD0 128 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 C11orf94C9JXX5 98 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 MANBAO00462 879 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 PIRO00625 290 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 PSPHP1O15172 72 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 SLC16A4O15374 487 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 TOX3O15405 576 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 HCRTO43612 131 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 KLRC4O43908 158 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 NDUFS5O43920 106 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 PSMB2P49721 201 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 TAS2R31P59538 309 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 KRTAP10-3P60369 221 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 MYL6P60660 151 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 CDK5Q00535 292 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 NDPQ00604 133 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 TOMM34Q15785 309 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 EXOC3L4Q17RC7 722 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 CDKL4Q5MAI5 379 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 IDNKQ5T6J7 187 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 FAM173BQ6P4H8 233 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 TMEM205Q6UW68 189 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 NT5DC3Q86UY8 548 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 MDP1Q86V88 176 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 ZCCHC24Q8N2G6 241 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 SPICQ8N5J4 248 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 OR52P1PQ8NH57 321 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 OR5AK3PQ8NH89 298 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 UBA3Q8TBC4 463 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 DCAKDQ8WVC6 231 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 ANKRD9Q96BM1 317 aaPredicted RBP3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 TMA16Q96EY4 203 aaKnown RBP3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 PHYHIPLQ96FC7 376 aa3.29□□□□□ -1.88
MTHFD1-216ENST00000557539 KCNS1Q96KK3 526 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms