RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TMEM225Q6GV28 225 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 FAHD2BQ6P2I3 314 aaPredicted RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 UNQ9370/PRO34162Q6UXP9 181 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 HIST2H3AQ71DI3 136 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 SSX8Q7RTT4 187 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 DPY19L4Q7Z388 723 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 FAM220AQ7Z4H9 259 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ABHD12BQ7Z5M8 362 aaPredicted RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 C20orf196Q8IYI0 205 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ZADH2Q8N4Q0 377 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 TMEM251Q8N6I4 163 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 C15orf54Q8N8G6 183 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ZIC4Q8N9L1 334 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 C20orf203Q8NBC4 194 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CYB561A3Q8NBI2 242 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 SUMF2Q8NBJ7 301 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ATP6V1C2Q8NEY4 427 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 FDCSPQ8NFU4 85 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 OR51G2Q8NGK0 314 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 OR10D3Q8NH80 312 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 RNF133Q8WVZ7 376 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 SPRYD4Q8WW59 207 aaPredicted RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 S100ZQ8WXG8 99 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ACOT12Q8WYK0 555 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 AP3S1Q92572 193 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 SLC25A46Q96AG3 418 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 C10orf35Q96D05 121 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ZMYND19Q96E35 227 aaPredicted RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 FAHD2AQ96GK7 314 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 C4orf36Q96KX1 117 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 KCTD7Q96MP8 289 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 OR2M2Q96R28 347 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CHRDL1Q9BU40 450 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 MROQ9BYG7 248 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 SRXN1Q9BYN0 137 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 DCSTAMPQ9H295 470 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 OR51V1Q9H2C8 321 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 C1orf198Q9H425 327 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CALHM2Q9HA72 323 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 RPRD1BQ9NQG5 326 aaKnown RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 MMP26Q9NRE1 261 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 TXNL4BQ9NX01 149 aaKnown RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 GLTPQ9NZD2 209 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CLCF1Q9UBD9 225 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CYB5R1Q9UHQ9 305 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 LAMP5Q9UJQ1 280 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 MCTS1Q9ULC4 181 aaKnown RBP2.26□□□□□ -2.05
VRK1-207ENST00000557352 SSR3Q9UNL2 185 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 COPS3Q9UNS2 423 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 UGT2A1Q9Y4X1 527 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 MAB21L2Q9Y586 359 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 CACNA1BQ00975 2339 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 ITPR1Q14643 2758 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 FAM208BQ5VWN6 2430 aa2.26□□□□□ -2.05
VRK1-207ENST00000557352 NBEAQ8NFP9 2946 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 TRGV5A0A0B4J1U4 118 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 IGHV7-81A0A0B4J1V7 117 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 KIR2DL5BA0A0G2JN68 375 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 KIR2DL5BA0A0G2JPC4 375 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 A0A0J9YXY3 114 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 CCDC160A6NGH7 325 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR4C45A6NMZ5 311 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ZNF726A6NNF4 738 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 FAM166BA8MTA8 275 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ZNF879B4DU55 563 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ZNF878C9JN71 531 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ZNF593O00488 134 aaPredicted RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 GABRPO00591 440 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 RRP8O43159 456 aaKnown RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 KALRNO60229 2985 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 SLC16A7O60669 478 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 SS18L1O75177 396 aaPredicted RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 OPN1LWP04000 364 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 GYPBP06028 91 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 CST2P09228 141 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 UBCP0CG48 685 aaKnown RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 HSMCR30P0CW71 290 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 GABRA1P14867 456 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ZNF823P16415 610 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 CELP19835 753 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 PTNP21246 168 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 CCL1P22362 96 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 PYCR1P32322 319 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 NAA10P41227 235 aaPredicted RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 GUCA1AP43080 201 aaPredicted RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 GDI2P50395 445 aaKnown RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 RORCP51449 518 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR12D2P58182 307 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 BPIFB3P59826 476 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 PCBD1P61457 104 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 VBP1P61758 197 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 NCS1P62166 190 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 RPS11P62280 158 aaKnown RBP eCLIP2.25□□□□□ -2.05
VRK1-207ENST00000557352 FABP5Q01469 135 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 PLGLB1Q02325 96 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 SPCS2Q15005 226 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 AANATQ16613 207 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 TATDN3Q17R31 274 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ZNF404Q494X3 552 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 Q499Y3 187 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms