RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ODF3L1Q8IXM7 274 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 SYS1Q8N2H4 156 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 TCTEX1D1Q8N7M0 179 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 NPBQ8NG41 125 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 ABHD5Q8WTS1 349 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 TRUB1Q8WWH5 349 aaKnown RBP6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 RGP1Q92546 391 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 LGALS12Q96DT0 336 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 S100A13Q99584 98 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 NABP2Q9BQ15 211 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 ABHD14AQ9BUJ0 271 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 CST11Q9H112 138 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 RETNQ9HD89 108 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 RAB9BQ9NP90 201 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 TMEM138Q9NPI0 162 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 PAK1IP1Q9NWT1 392 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 AASSQ9UDR5 926 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 OAZ3Q9UMX2 235 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 FRAS1Q86XX4 4008 aa6.91□□□□□ -1.3
HNRNPC-227ENST00000556897 MCRIP1C9JLW8 97 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 FCN1O00602 326 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 NDUFA3O95167 84 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 EGR2P11161 476 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 PPP1CCP36873 323 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 OR3A3P47888 321 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 SMCPP49901 116 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 CRIP2P52943 208 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 TPPP2P59282 170 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 PPP3R1P63098 170 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 ACTBL2Q562R1 376 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 SLC25A30Q5SVS4 291 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 MEDAGQ5VYS4 303 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 ZNF660Q6AZW8 331 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 RAB12Q6IQ22 244 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 PYHIN1Q6K0P9 492 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 C5orf24Q7Z6I8 188 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 OR52L2PQ8NGH6 319 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 MRPL48Q96GC5 212 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 CYYR1Q96J86 154 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 FAM110AQ9BQ89 295 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 FAM103A1Q9BTL3 118 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 TMED9Q9BVK6 235 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 FBXL15Q9H469 300 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 TUBA4BQ9H853 241 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 TAF9BQ9HBM6 251 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 SPACA1Q9HBV2 294 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 RCC2Q9P258 522 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 EXOGQ9Y2C4 368 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 NUBP2Q9Y5Y2 271 aa6.9□□□□□ -1.3
HNRNPC-227ENST00000556897 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.31
HNRNPC-227ENST00000556897 hCG_2014768A0A024R1R8 64 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 SAA2-SAA4A0A096LPE2 208 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 SNTNA6NMZ2 147 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 ZNF780AO75290 641 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 CD2P06729 351 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 SAA2P0DJI9 122 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 GBX2P52951 348 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 SNRPGP62308 76 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 TMEM267Q0VDI3 215 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 RAB40BQ12829 278 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 PLGLAQ15195 96 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 TRAT1Q6PIZ9 186 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 CD200R1LQ6Q8B3 271 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 UNQ5815/PRO19632Q6UWF5 114 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 FAM131AQ6UXB0 335 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 ZNF833PQ6ZTB9 187 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 GTSCR1Q86UQ5 136 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 PPP1R27Q86WC6 154 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 GAPTQ8N292 157 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 GPR148Q8TDV2 347 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 TMEM106AQ96A25 262 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 SLC7A6OSQ96CW6 309 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 ORAI1Q96D31 301 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 ZNF184Q99676 751 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 THAP7Q9BT49 309 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 ERVK13-1Q9NX77 482 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 CNOT2Q9NZN8 540 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 RNF150Q9ULK6 438 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 GAB2Q9UQC2 676 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 AP4S1Q9Y587 144 aa6.89□□□□□ -1.31
HNRNPC-227ENST00000556897 SAC3D1A6NKF1 404 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 H0Y980 276 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 RRHO14718 337 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 ARPC1BO15143 372 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 RGS11O94810 467 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 TRGV3P03979 118 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 MAS1P04201 325 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 FCGR1AP12314 374 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 ZP3P21754 424 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 CD40LGP29965 261 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 BDKRB2P30411 391 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 TNP2Q05952 138 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 MRPL28Q13084 256 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 RIPK1Q13546 671 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 AKIRIN2Q53H80 203 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 XAF1Q6GPH4 301 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 IL34Q6ZMJ4 242 aa6.88□□□□□ -1.31
HNRNPC-227ENST00000556897 LFNGQ8NES3 379 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms