RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 HTD2P86397 168 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 ARL6IP1Q15041 203 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 CCBE1Q6UXH8 406 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-207ENST00000556831 Q6ZNX1 250 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 TGIF2LXQ8IUE1 241 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 FAM89BQ8N5H3 189 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 DRAM1Q8N682 238 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 OR2AK2Q8NG84 335 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 PHF21AQ96BD5 680 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 ARHGAP5-AS1Q96IT6 56 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 ABHD14AQ9BUJ0 271 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 PECRQ9BY49 303 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 OR51E2Q9H255 320 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 DAPK2Q9UIK4 370 aa11.31□□□□□ -0.6
SLIRP-207ENST00000556831 A0A075B6Q4 140 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 SCGNO76038 276 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 SNRNP70P08621 437 aaKnown RBP11.3□□□□□ -0.6
SLIRP-207ENST00000556831 VSIG10L2P0DP72 767 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 ZNF182P17025 639 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-207ENST00000556831 TALDO1P37837 337 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 REG1BP48304 166 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 MXD1Q05195 221 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 ZNF816Q0VGE8 651 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-207ENST00000556831 HMGN3Q15651 99 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
SLIRP-207ENST00000556831 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 OR52L2PQ8NGH6 319 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 CHPT1Q8WUD6 406 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 PTX4Q96A99 478 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 YIPF6Q96EC8 236 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
SLIRP-207ENST00000556831 CITED1Q99966 193 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 ATG5Q9H1Y0 275 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 SIGLEC9Q9Y336 463 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 MOB4Q9Y3A3 225 aa11.3□□□□□ -0.6
SLIRP-207ENST00000556831 RYR3Q15413 4870 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 IGHV1-3A0A0C4DH29 117 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 A0A1W2PPI3 338 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 SHISA3A0PJX4 238 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 NAPSAO96009 420 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 PPP1CCP36873 323 aaKnown RBP11.29□□□□□ -0.6
SLIRP-207ENST00000556831 EFNB2P52799 333 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 HLA-DRB3P79483 266 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 ARFRP1Q13795 201 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 FBLN7Q53RD9 439 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 C9orf152Q5JTZ5 239 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 SFXN4Q6P4A7 337 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 THNSL2Q86YJ6 484 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 OR10R2Q8NGX6 335 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 RTN4IP1Q8WWV3 396 aaPredicted RBP11.29□□□□□ -0.6
SLIRP-207ENST00000556831 ZNF702PQ9H963 129 aa11.29□□□□□ -0.6
SLIRP-207ENST00000556831 TRBV6-6A0A0A6YYG2 114 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 AIREO43918 545 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 YPEL1O60688 119 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-207ENST00000556831 ZBTB25P24278 435 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 SDC2P34741 201 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 GNMTQ14749 295 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 C2orf68Q2NKX9 166 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 ABCA11PQ4W5N1 156 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 MORN2Q502X0 79 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 OR2T10Q8NGZ9 312 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 EDARADDQ8WWZ3 215 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 YPEL2Q96QA6 119 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 HDHD3Q9BSH5 251 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-207ENST00000556831 MMP27Q9H306 513 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 CCDC59Q9P031 241 aaKnown RBP11.28□□□□□ -0.6
SLIRP-207ENST00000556831 SLC23A1Q9UHI7 598 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 VWFP04275 2813 aa11.28□□□□□ -0.6
SLIRP-207ENST00000556831 A0A0B4J203 849 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 A0A1B0GVG6 124 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 SLC31A2O15432 143 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 HIST1H1DP16402 221 aaKnown RBP11.27□□□□□ -0.61
SLIRP-207ENST00000556831 CD40LGP29965 261 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 DIAPH2-AS1Q14236 149 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 HABP2Q14520 560 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-207ENST00000556831 HNF4GQ14541 408 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 KIR2DS1Q14954 304 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 CTF1Q16619 201 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 TRIM16LQ309B1 348 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 FAM53AQ6NSI3 398 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-207ENST00000556831 ZNF880Q6PDB4 577 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 Q8N2B8 174 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 ZNF439Q8NDP4 499 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 S1PR3Q99500 378 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 CENPOQ9BU64 300 aa11.27□□□□□ -0.61
SLIRP-207ENST00000556831 IGHV3-72A0A0B4J1Y9 119 aa11.26□□□□□ -0.61
SLIRP-207ENST00000556831 NCBP2LA6PVI3 153 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms