RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 DPPA2Q7Z7J5 298 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 NAA40Q86UY6 237 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 MYPOPQ86VE0 399 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 SKA3Q8IX90 412 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM123Q8N131 208 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 COMMD1Q8N668 190 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 OR1J1Q8NGS3 322 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 OR13C3Q8NGS6 347 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 OR10K1Q8NGX5 313 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 OR6X1Q8NH79 312 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TERB2Q8NHR7 220 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 COQ8AQ8NI60 647 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 KCNG3Q8TAE7 436 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 ST7LQ8TDW4 575 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 CCL17Q92583 94 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM54Q969K7 222 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM186Q96B77 213 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 RAB39BQ96DA2 213 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 SNX22Q96L94 193 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 LINC00052Q96N35 136 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 URM1Q9BTM9 101 aaKnown RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PDCD10Q9BUL8 212 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 ABHD6Q9BV23 337 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 BCL2L14Q9BZR8 327 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 EGLN1Q9GZT9 426 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 BEX1Q9HBH7 125 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 IFT46Q9NQC8 304 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 G6PC2Q9NQR9 355 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PCDHB16Q9NRJ7 776 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 MRPL22Q9NWU5 206 aaKnown RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 TAS2R3Q9NYW6 316 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 B3GAT1Q9P2W7 334 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 PURGQ9UJV8 347 aaKnown RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 GTF2A1LQ9UNN4 478 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 SLC22A13Q9Y226 551 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 KLHDC2Q9Y2U9 406 aa3.29□□□□□ -1.88
ATXN3-240ENST00000556339 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 NOP16Q9Y3C1 178 aaKnown RBP3.29□□□□□ -1.88
ATXN3-240ENST00000556339 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 IGHV1-69-2A0A0G2JMI3 117 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 LOC107986453A0A1B0GWG9 222 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 C5orf49A4QMS7 147 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 DHRS7CA6NNS2 312 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 C17orf100A8MU93 164 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SERPINE3A8MV23 424 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 FAM157AC9JC47 383 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 F5H0A9 414 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 H7C2Y5 167 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TSPAN4O14817 238 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TIMM8AO60220 97 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 MTRF1O75570 445 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 ATG12O94817 140 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 VENTXO95231 258 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SNAPINO95295 136 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SFT2D2O95562 160 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 PNPP00491 289 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 HLA-AP01891 365 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 GAPDHP04406 335 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 PRSS2P07478 247 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SPARCP09486 303 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 CTLA4P16410 223 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF14P17017 642 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 CCL1P22362 96 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TNFSF4P23510 183 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 LAP3P28838 519 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 CDAP32320 146 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 GNALP38405 381 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 PMELP40967 661 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 MAGEB1P43366 347 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 HOXA1P49639 335 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 EFNB2P52799 333 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TAS2R46P59540 309 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 PCBD1P61457 104 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 LSM6P62312 80 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 GRB2P62993 217 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 MRPS11P82912 194 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 QRFPP83859 136 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 BTN1A1Q13410 526 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 GUCA2BQ16661 112 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 CDNFQ49AH0 187 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SPATA46Q5T0L3 261 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 DHRS7BQ6IAN0 325 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 PRSS54Q6PEW0 395 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 NHLRC1Q6VVB1 395 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 HOGA1Q86XE5 327 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 BAP18Q8IXM2 172 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 FAM89BQ8N5H3 189 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR1M1Q8NGA1 313 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR5AP2Q8NGF4 316 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR52L2PQ8NGH6 319 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR56B1Q8NGI3 324 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR51A4Q8NGJ6 313 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR52B4Q8NGK2 314 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR13C8Q8NGS7 320 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 OR10R2Q8NGX6 335 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 AKR7LQ8NHP1 331 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms