RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 EXOGQ9Y2C4 368 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 MRPS28Q9Y2Q9 187 aaKnown RBP5.2□□□□□ -1.58
ATXN3-236ENST00000556220 V9GYS6 101 aa5.2□□□□□ -1.58
ATXN3-236ENST00000556220 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 PKD1P98161 4303 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 TRBV2A0A0J9YWF9 115 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 RIIAD1A6NNX1 92 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 PTGES3LE9PB15 166 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 HSD17B6O14756 317 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 SH2D1BO14796 132 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 ARPC1BO15143 372 aaKnown RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 SELENOFO60613 162 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 TNFAIP8O95379 198 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 CNIH1O95406 144 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 FADS2O95864 444 aaKnown RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 OR2H2O95918 312 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 HSPB1P04792 205 aaKnown RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 CSN2P05814 226 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 LGALS1P09382 135 aaKnown RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 EGR2P11161 476 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF3P17036 446 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 CD1BP29016 333 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 NPBWR2P48146 333 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 REG1BP48304 166 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 FUT6P51993 359 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 F2RL1P55085 397 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 ELLP55199 621 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 GABARAPL2P60520 117 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 ST3GAL4Q11206 333 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 SPCS2Q15005 226 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 NEDD8Q15843 81 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 CNPY1Q3B7I2 92 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 KRBOX4Q5JUW0 171 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 SPIN3Q5JUX0 258 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 RBM48Q5RL73 367 aaKnown RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 SYT6Q5T7P8 510 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 UBE2UQ5VVX9 321 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 Q6ZSR3 168 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF565Q8N9K5 539 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 MINDY2Q8NBR6 621 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 OR2T33Q8NG76 320 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 RGP1Q92546 391 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 OTULINQ96BN8 352 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 MROQ9BYG7 248 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 MRPS26Q9BYN8 205 aaKnown RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 TTTY10Q9BZA0 68 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 OR51V1Q9H2C8 321 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 LINC00574Q9H8X3 128 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 FGF20Q9NP95 211 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 IDI2-AS1Q9NZ38 188 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 OR6C3Q9NZP0 311 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 MRM2Q9UI43 246 aaKnown RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF107Q9UII5 783 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 LAMP5Q9UJQ1 280 aa5.19□□□□□ -1.58
ATXN3-236ENST00000556220 KLK5Q9Y337 293 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-236ENST00000556220 TRAV41A0A0B4J266 112 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 A0A1B0GTI1 187 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 DHRS7CA6NNS2 312 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 H3BN98 237 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 SRSF10O75494 262 aaKnown RBP5.18□□□□□ -1.58
ATXN3-236ENST00000556220 GPX5O75715 221 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 RGS11O94810 467 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 SPDEFO95238 335 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 TTRP02766 147 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 MRPL3P09001 348 aaKnown RBP5.18□□□□□ -1.58
ATXN3-236ENST00000556220 CALCBP10092 127 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 PRKACAP17612 351 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 BCL3P20749 454 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 GTF2A1P52655 376 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-236ENST00000556220 SNU13P55769 128 aaKnown RBP5.18□□□□□ -1.58
ATXN3-236ENST00000556220 RAB40BQ12829 278 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 UBE2V2Q15819 145 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF829Q3KNS6 432 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-236ENST00000556220 IL34Q6ZMJ4 242 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 PRSS48Q7RTY5 328 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 NR2C2APQ86WQ0 139 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 ZFP41Q8N8Y5 198 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 TMEM104Q8NE00 496 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF555Q8NEP9 628 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 OR8J1Q8NGP2 316 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 TMEM106AQ96A25 262 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 COQ2Q96H96 371 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 ARPC5LQ9BPX5 153 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 YTHDF1Q9BYJ9 559 aaKnown RBP5.18□□□□□ -1.58
ATXN3-236ENST00000556220 EXOSC4Q9NPD3 245 aaKnown RBP5.18□□□□□ -1.58
ATXN3-236ENST00000556220 CALYQ9NYX4 217 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 GSTK1Q9Y2Q3 226 aa5.18□□□□□ -1.58
ATXN3-236ENST00000556220 A0A1W2PPE3 182 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF736B4DX44 427 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-236ENST00000556220 NPIPB11E5RHQ5 1161 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 H3BMQ9 156 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 ATP6V0E1O15342 81 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 ZNF254O75437 659 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 IL1AP01583 271 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 SLC2A2P11168 524 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-236ENST00000556220 DCKP27707 260 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 HTR1FP30939 366 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 RPL5P46777 297 aaKnown RBP5.17□□□□□ -1.58
ATXN3-236ENST00000556220 GNG10P50151 68 aa5.17□□□□□ -1.58
ATXN3-236ENST00000556220 RIDAP52758 137 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms