RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 AIREO43918 545 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 CD3GP09693 182 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 HIST1H1DP16402 221 aaKnown RBP12.13□□□□□ -0.47
ACTN1-217ENST00000556203 TMEM11P17152 192 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 ZNF137PP52743 207 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
ACTN1-217ENST00000556203 HNF4GQ14541 408 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 ARSJQ5FYB0 599 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-217ENST00000556203 RTN4IP1Q8WWV3 396 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-217ENST00000556203 SERTAD4Q9NUC0 356 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 TENM1Q9UKZ4 2725 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 SH2D7A6NKC9 451 aaPredicted RBP12.12□□□□□ -0.47
ACTN1-217ENST00000556203 TRIM64CA6NLI5 447 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 LPLP06858 475 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 SCTP09683 121 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 TGFBR1P36897 503 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 HERPUD1Q15011 391 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 TMEM95Q3KNT9 176 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 ABCA11PQ4W5N1 156 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 PRR31Q5SQ13 230 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 LY6G6FQ5SQ64 297 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 IDNKQ5T6J7 187 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 TGIF2LXQ8IUE1 241 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 OR2AK2Q8NG84 335 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 LGALS14Q8TCE9 139 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 SLC23A1Q9UHI7 598 aa12.12□□□□□ -0.47
ACTN1-217ENST00000556203 SERPINE3A8MV23 424 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 TRDCB7Z8K6 153 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 M0QZK8 103 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 TXNL1O43396 289 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 LANCL1O43813 399 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 PEX14O75381 377 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 AMY1AP04745 511 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 AMY2AP04746 511 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 FCGR3AP08637 254 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 VDAC2P45880 294 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-217ENST00000556203 LSM3P62310 102 aaKnown RBP12.11□□□□□ -0.47
ACTN1-217ENST00000556203 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 IZUMO1Q8IYV9 350 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 IFI27L2Q9H2X8 130 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 OR1A1Q9P1Q5 309 aa12.11□□□□□ -0.47
ACTN1-217ENST00000556203 ZNF736B4DX44 427 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-217ENST00000556203 ST8SIA5O15466 376 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 HSPA12AO43301 675 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 SMIM18P0DKX4 95 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 ZBTB25P24278 435 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 CD1BP29016 333 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 CEACAM6P40199 344 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 ARFRP1Q13795 201 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 C11orf44Q8N8P7 122 aa12.1□□□□□ -0.47
ACTN1-217ENST00000556203 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-217ENST00000556203 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
ACTN1-217ENST00000556203 SAA2-SAA4A0A096LPE2 208 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 M0QZ24 198 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 FABP7O15540 132 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 SAA2P0DJI9 122 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-217ENST00000556203 TALDO1P37837 337 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 OR3A3P47888 321 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 SCAND1P57086 179 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 EBI3Q14213 229 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 CDNFQ49AH0 187 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 C5orf56Q8N8D9 126 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 OR5H6Q8NGV6 325 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 OR2T10Q8NGZ9 312 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 MAFIPQ8WZ33 124 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 RBMXL1Q96E39 390 aaKnown RBP12.09□□□□□ -0.47
ACTN1-217ENST00000556203 MRPL20Q9BYC9 149 aaKnown RBP12.09□□□□□ -0.47
ACTN1-217ENST00000556203 WNT10AQ9GZT5 417 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 RHBDL2Q9NX52 303 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 ZNF230Q9UIE0 474 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-217ENST00000556203 ELF5Q9UKW6 265 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-217ENST00000556203 ETV7Q9Y603 341 aa12.09□□□□□ -0.47
ACTN1-217ENST00000556203 SCGNO76038 276 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 MOSP00540 346 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 LSAMPQ13449 338 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 KIR2DS1Q14954 304 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 ZNF833PQ6ZTB9 187 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 Q8N6K4 173 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 OR4A4PQ8NGN8 299 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 OR13F1Q8NGS4 319 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 FUNDC2Q9BWH2 189 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.08□□□□□ -0.48
ACTN1-217ENST00000556203 PIPOXQ9P0Z9 390 aa12.08□□□□□ -0.48
ACTN1-217ENST00000556203 NCBP2LA6PVI3 153 aaKnown RBP12.07□□□□□ -0.48
ACTN1-217ENST00000556203 ITGB1BP1O14713 200 aa12.07□□□□□ -0.48
ACTN1-217ENST00000556203 RAB29O14966 203 aa12.07□□□□□ -0.48
ACTN1-217ENST00000556203 FGF16O43320 207 aa12.07□□□□□ -0.48
ACTN1-217ENST00000556203 FBXO24O75426 580 aa12.07□□□□□ -0.48
ACTN1-217ENST00000556203 GSTT2P0CG29 244 aa12.07□□□□□ -0.48
ACTN1-217ENST00000556203 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
ACTN1-217ENST00000556203 RPS19P39019 145 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms