RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 HLA-DQA1P01909 254 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 HSPB1P04792 205 aaKnown RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 HOXB3P14651 431 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 OR10J1P30954 320 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 PSG4Q00888 419 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 C16orf82Q7Z2V1 217 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 NEU4Q8WWR8 484 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-216ENST00000556083 IDI2-AS1Q9NZ38 188 aa9.31□□□□□ -0.92
ACTN1-216ENST00000556083 COL24A1Q17RW2 1714 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 A0A1W2PR80 420 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 CLDN14O95500 239 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 CA7P43166 264 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 UQCRFS1P47985 274 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 TWIST1Q15672 202 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM255AQ5JRV8 349 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 SCGB1D4Q6XE38 83 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 ARID1BQ8NFD5 2236 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-216ENST00000556083 CXorf65A6NEN9 183 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 TM4SF5O14894 197 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 FABP4P15090 132 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 PEBP1P30086 187 aaKnown RBP9.3□□□□□ -0.92
ACTN1-216ENST00000556083 SPNS3Q6ZMD2 512 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 MRGPRFQ96AM1 343 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 GGACTQ9BVM4 153 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 OR2J1Q9GZK6 312 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 LPAR5Q9H1C0 372 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 TRBV9A0A0B4J1U6 114 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 PPOXP50336 477 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 HSPE1P61604 102 aaKnown RBP9.3□□□□□ -0.92
ACTN1-216ENST00000556083 COL10A1Q03692 680 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 RTN4RL2Q86UN3 420 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 GVQW1Q8N7I0 195 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM56-RWDD3S4R434 201 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 ECM29Q5VYK3 1845 aa9.3□□□□□ -0.92
ACTN1-216ENST00000556083 IGLV3-19P01714 112 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 BCL2P10415 239 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 CSRP2Q16527 193 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 C1QL3Q5VWW1 255 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 CD200R1LQ6Q8B3 271 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 OR10D4PQ8NGN7 298 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 NAGKQ9UJ70 344 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.29□□□□□ -0.92
ACTN1-216ENST00000556083 ADAP1O75689 374 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 LOXL3P58215 753 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 DLK1P80370 383 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 HIKESHIQ53FT3 197 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 SPANXN1Q5VSR9 72 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 MRPL24Q96A35 216 aaKnown RBP9.29□□□□□ -0.92
ACTN1-216ENST00000556083 RAX2Q96IS3 184 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 PRSS27Q9BQR3 290 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 MRPL37Q9BZE1 423 aaKnown RBP9.29□□□□□ -0.92
ACTN1-216ENST00000556083 FZR1Q9UM11 496 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 CROCCQ5TZA2 2017 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 CACNA1CQ13936 2221 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 KNL1Q8NG31 2342 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 LIPFP07098 398 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 PMCHL1Q16048 86 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM88Q6PEY1 159 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 OR4C13Q8NGP0 309 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 CTHRC1Q96CG8 243 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 MIEN1Q9BRT3 115 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 SPAARA0A1B0GVQ0 90 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 CEACAM18A8MTB9 384 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 PATE4P0C8F1 98 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 PMS2P11Q13670 270 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 TIMM23BQ5SRD1 257 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 AMMECR1LQ6DCA0 310 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM91Q6ZNR0 172 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 OR2I1PQ8NGU4 316 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 NARFLQ9H6Q4 476 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 AP5S1Q9NUS5 200 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 GPR132Q9UNW8 380 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 SHROOM3Q8TF72 1996 aa9.29□□□□□ -0.92
ACTN1-216ENST00000556083 TRBV5-7A0A0A0MS05 114 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 ODAMA1E959 279 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 NKX2-6A6NCS4 301 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 GHRHP01286 108 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 APCSP02743 223 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 SIGIRRQ6IA17 410 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 FAM24BQ8N5W8 94 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 OR4D11Q8NGI4 311 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 OR52M1Q8NGK5 317 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 DDB2Q92466 427 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.28□□□□□ -0.92
ACTN1-216ENST00000556083 IGLV1-36A0A0B4J1U3 117 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 CCL2P13500 99 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 SPNP16150 400 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 MAS1LP35410 378 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 CAMPP49913 170 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 AWAT1Q58HT5 328 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 ADAT3Q96EY9 351 aaPredicted RBP9.28□□□□□ -0.92
ACTN1-216ENST00000556083 ST6GAL2Q96JF0 529 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 RHOVQ96L33 236 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 ZNF385AQ96PM9 386 aaKnown RBP9.28□□□□□ -0.92
ACTN1-216ENST00000556083 FAM157AC9JC47 383 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 CD99P14209 185 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 SLC35E4Q6ICL7 350 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms