RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 CMSS1Q9BQ75 279 aaKnown RBP10.94□□□□□ -0.66
SHMT2-219ENST00000555563 KCNK7Q9Y2U2 307 aa10.94□□□□□ -0.66
SHMT2-219ENST00000555563 A0A087WXM4 84 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 M0QZ24 198 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 RAB27BO00194 218 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 MFNGO00587 321 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 KCNAB3O43448 404 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 CLEC2LP0C7M8 214 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 HNF4GQ14541 408 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 STEAP3Q658P3 488 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 TREML4Q6UXN2 200 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 TGIF2LXQ8IUE1 241 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 OR10R2Q8NGX6 335 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 CENPOQ9BU64 300 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 Q9N2K0 584 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 DAPK2Q9UIK4 370 aa10.93□□□□□ -0.66
SHMT2-219ENST00000555563 M0QZK8 103 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 TXNL1O43396 289 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 LANCL1O43813 399 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 RGS11O94810 467 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 TSPAN15O95858 294 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 LPLP06858 475 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 SNRPBP14678 240 aaKnown RBP10.92□□□□□ -0.66
SHMT2-219ENST00000555563 HIST1H1DP16402 221 aaKnown RBP10.92□□□□□ -0.66
SHMT2-219ENST00000555563 MXD1Q05195 221 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 LY6G6FQ5SQ64 297 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 SFXN4Q6P4A7 337 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 ODF3L1Q8IXM7 274 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 C5orf56Q8N8D9 126 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 OR2AK2Q8NG84 335 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 LGALS14Q8TCE9 139 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 WIPF2Q8TF74 440 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-219ENST00000555563 PTX4Q96A99 478 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 WNT10AQ9GZT5 417 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 PARP12Q9H0J9 701 aaKnown RBP10.92□□□□□ -0.66
SHMT2-219ENST00000555563 IFI27L2Q9H2X8 130 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 VCX3AQ9NNX9 186 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 OR1A1Q9P1Q5 309 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 MGAT4AQ9UM21 535 aa10.92□□□□□ -0.66
SHMT2-219ENST00000555563 TET2Q6N021 2002 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-219ENST00000555563 A0A075B6Q4 140 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 METTL21EPA6NDL7 271 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 ZNF736B4DX44 427 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-219ENST00000555563 ST8SIA5O15466 376 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 PEX14O75381 377 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 FBXO24O75426 580 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 SCTP09683 121 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 CD3GP09693 182 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 GNB3P16520 340 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 EBI3Q14213 229 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 C2orf68Q2NKX9 166 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 Q8N6K4 173 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 RBMXL1Q96E39 390 aaKnown RBP10.91□□□□□ -0.66
SHMT2-219ENST00000555563 YIPF6Q96EC8 236 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 EAF1Q96JC9 268 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-219ENST00000555563 MRPL20Q9BYC9 149 aaKnown RBP10.91□□□□□ -0.66
SHMT2-219ENST00000555563 ATG5Q9H1Y0 275 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 SLC23A1Q9UHI7 598 aa10.91□□□□□ -0.66
SHMT2-219ENST00000555563 SAA2-SAA4A0A096LPE2 208 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 IGKV1-6A0A0C4DH72 117 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 SERPINE3A8MV23 424 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 FGF16O43320 207 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 FCGR3AP08637 254 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 SAA2P0DJI9 122 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-219ENST00000555563 CD28P10747 220 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 CD1BP29016 333 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 TGFBR1P36897 503 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 OR3A3P47888 321 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 MRPS15P82914 257 aaKnown RBP10.9□□□□□ -0.66
SHMT2-219ENST00000555563 LSAMPQ13449 338 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 TIMM50Q3ZCQ8 353 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 C9orf152Q5JTZ5 239 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 ZNF833PQ6ZTB9 187 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 OR2T10Q8NGZ9 312 aa10.9□□□□□ -0.66
SHMT2-219ENST00000555563 TRIM64CA6NLI5 447 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 TRDCB7Z8K6 153 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 HSPA12AO43301 675 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 RRP9O43818 475 aaKnown RBP10.89□□□□□ -0.67
SHMT2-219ENST00000555563 AIREO43918 545 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 MOSP00540 346 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 ZBTB25P24278 435 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 MAFIPQ8WZ33 124 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 MMP27Q9H306 513 aa10.89□□□□□ -0.67
SHMT2-219ENST00000555563 NCBP2LA6PVI3 153 aaKnown RBP10.88□□□□□ -0.67
SHMT2-219ENST00000555563 FABP7O15540 132 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 CSF1P09603 554 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 CEACAM6P40199 344 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 ARFRP1Q13795 201 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 RPL39P5Q59GN2 51 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 FAM71F2Q6NXP2 309 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 Q8N9W7 124 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 OR4A4PQ8NGN8 299 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 OR5H6Q8NGV6 325 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 SLC25A38Q96DW6 304 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-219ENST00000555563 NABP2Q9BQ15 211 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 ZNF251Q9BRH9 671 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 CABLES2Q9BTV7 478 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms