RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 IGHV3OR15-7A0A075B7D8 119 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 LINC00862A6NCI5 91 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 EFCAB9A8MZ26 197 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 BOLA2-SMG1P6H3BVE0 249 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 UBFD1O14562 309 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 UBE2L6O14933 153 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 ZW10O43264 779 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 ASS1P00966 412 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 CSTAP01040 98 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 BPGMP07738 259 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 ATF1P18846 271 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 CRHBPP24387 322 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 GADD45AP24522 165 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 PSMD7P51665 324 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 AKR1C2P52895 323 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 TMEM258P61165 79 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 VSNL1P62760 191 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 GTF2BQ00403 316 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 BAXQ07812 192 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 HNRNPA1L2Q32P51 320 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 MRPL51Q4U2R6 128 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 TMEM155Q4W5P6 130 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 TRMT12Q53H54 448 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 OR10J3Q5JRS4 329 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 TIMM23BQ5SRD1 257 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 XKRXQ6PP77 449 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 AHSA2Q719I0 299 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 SLC35E3Q7Z769 313 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 SPICQ8N5J4 248 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 PACRGLQ8N7B6 248 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 ZNF283Q8N7M2 679 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 CCDC112Q8NEF3 446 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 SPACA4Q8TDM5 124 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 C10orf105Q8TEF2 133 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 CYGBQ8WWM9 190 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 TMIGD2Q96BF3 282 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 MRAP2Q96G30 205 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 TRNT1Q96Q11 434 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 MIEN1Q9BRT3 115 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 MND1Q9BWT6 205 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 OR51E2Q9H255 320 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 SMDT1Q9H4I9 107 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 RMND1Q9NWS8 449 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 DOK5Q9P104 306 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 PSORS1C2Q9UIG4 136 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 NXT1Q9UKK6 140 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 SCML1Q9UN30 329 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 ANGPT4Q9Y264 503 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 RBMX2Q9Y388 322 aaKnown RBP0.38□□□□□ -2.35
SRP54-207ENST00000555535 ALG5Q9Y673 324 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 MTCH2Q9Y6C9 303 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 GPR98Q8WXG9 6306 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 RP1P56715 2156 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 TMSB15BA0A087X1C1 80 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 IGHV3-15A0A0B4J1V0 119 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 H0YC42 278 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 TMEM250H0YL14 139 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 GPR171O14626 319 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 GNRH2O43555 120 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 DENRO43583 198 aaKnown RBP0.37□□□□□ -2.35
SRP54-207ENST00000555535 CYTH3O43739 400 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 PGLYRP1O75594 196 aaPredicted RBP0.37□□□□□ -2.35
SRP54-207ENST00000555535 TNFAIP8O95379 198 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 CRPP02741 224 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 CRYGCP07315 174 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 CTSEP14091 401 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 BGNP21810 368 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 CCNOP22674 350 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 NUP62P37198 522 aaPredicted RBP0.37□□□□□ -2.35
SRP54-207ENST00000555535 PRB3Q04118 309 aaPredicted RBP0.37□□□□□ -2.35
SRP54-207ENST00000555535 CD164Q04900 197 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 SURF2Q15527 256 aaPredicted RBP0.37□□□□□ -2.35
SRP54-207ENST00000555535 CENPWQ5EE01 88 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 HENMT1Q5T8I9 393 aaKnown RBP0.37□□□□□ -2.35
SRP54-207ENST00000555535 TTC33Q6PID6 262 aaPredicted RBP0.37□□□□□ -2.35
SRP54-207ENST00000555535 Q6ZT83 130 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 LRRC6Q86X45 466 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 CDRT4Q8N9R6 151 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 TMEM75Q8N9X5 138 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 OR8B12Q8NGG6 310 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 OR51T1Q8NGJ9 327 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 LRRC20Q8TCA0 184 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 LGALS14Q8TCE9 139 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 DTD1Q8TEA8 209 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 GTF2H4Q92759 462 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 TMBIM1Q969X1 311 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 Q9BRP9 147 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 UPK3BQ9BT76 320 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 GTSF1LQ9H1H1 148 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 STK38LQ9Y2H1 464 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 SNX24Q9Y343 169 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 FIS1Q9Y3D6 152 aa0.37□□□□□ -2.35
SRP54-207ENST00000555535 PUS1Q9Y606 427 aaKnown RBP eCLIP0.37□□□□□ -2.35
SRP54-207ENST00000555535 ANAPC1Q9H1A4 1944 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 RAB3GAP2Q9H2M9 1393 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 DIDO1Q9BTC0 2240 aaKnown RBP0.36□□□□□ -2.35
SRP54-207ENST00000555535 TRAV41A0A0B4J266 112 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 C2orf74A8MZ97 194 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 OR11H12B2RN74 326 aa0.36□□□□□ -2.35
SRP54-207ENST00000555535 E7EWF7 191 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms