RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 SAT2Q96F10 170 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-216ENST00000554975 TAS2R3Q9NYW6 316 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 TREM2Q9NZC2 230 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 IGKV1D-8A0A087WSZ0 117 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 TMEM89A2RUT3 159 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 ATP6V1G2-DDX39BF2Z307 99 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 GPR31O00270 319 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 WNT2P09544 360 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 BCL3P20749 454 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 PDLIM4P50479 330 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 FXYD4P59646 89 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 BLOC1S1P78537 153 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 MZT1Q08AG7 82 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 TMEM187Q14656 261 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 DMRTC1Q5HYR2 192 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 C1QTNF12Q5T7M4 302 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 GPR157Q5UAW9 335 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 MDP1Q86V88 176 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 CMTM1Q8IZ96 169 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 SLAMF9Q96A28 289 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 BOD1Q96IK1 185 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF75AQ96N20 296 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 PIMREGQ9BSJ6 248 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 Q9N2K0 584 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 PCDHB10Q9UN67 800 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 POMT1Q9Y6A1 747 aa9.32□□□□□ -0.92
SHMT2-216ENST00000554975 WNK2Q9Y3S1 2297 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 ZSCAN5BA6NJL1 495 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 TRDCB7Z8K6 153 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 NPIPB11E5RHQ5 1161 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 BET1O15155 118 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 OR5AC1P0C628 307 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 RAC2P15153 192 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 PRKACAP17612 351 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 RPL12P30050 165 aaKnown RBP9.31□□□□□ -0.92
SHMT2-216ENST00000554975 IDH3GP51553 393 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-216ENST00000554975 HLA-DRB3P79483 266 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 MST1LQ2TV78 715 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 SPIN3Q5JUX0 258 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 PRR31Q5SQ13 230 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 HAGHLQ6PII5 290 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-216ENST00000554975 FAM58AQ8N1B3 248 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 SPERTQ8NA61 448 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 PCNPQ8WW12 178 aaKnown RBP9.31□□□□□ -0.92
SHMT2-216ENST00000554975 MARC2Q969Z3 335 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 KIRREL1Q96J84 757 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 OR10C1Q96KK4 312 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 CABLES2Q9BTV7 478 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 RNF126Q9BV68 326 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 BPESC1Q9GZL8 116 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 SLC5A7Q9GZV3 580 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 WDR13Q9H1Z4 485 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 NARFLQ9H6Q4 476 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 MMP26Q9NRE1 261 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 TMEM100Q9NV29 134 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 OR5AC2Q9NZP5 309 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 GSKIPQ9P0R6 139 aa9.31□□□□□ -0.92
SHMT2-216ENST00000554975 NBEAL2Q6ZNJ1 2754 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 IGHV1-18A0A0C4DH31 117 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 IQCF6A8MYZ5 107 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 H0YIZ8 118 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 TMPRSS2O15393 492 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 ST8SIA3O43173 380 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 GPR137BO60478 399 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 CRYAAP02489 173 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 MMP9P14780 707 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 AADACP22760 399 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 P2RY1P47900 373 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 PPP1CBP62140 327 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 GNMTQ14749 295 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 SPAG16Q8N0X2 631 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 COMMD1Q8N668 190 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 ADAT1Q9BUB4 502 aaKnown RBP9.3□□□□□ -0.92
SHMT2-216ENST00000554975 TMEM222Q9H0R3 208 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 WNK1Q9H4A3 2382 aa9.3□□□□□ -0.92
SHMT2-216ENST00000554975 C3orf85A0A1B0GTC6 90 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 FAM157AC9JC47 383 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 H0Y980 276 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 NDUFS8O00217 210 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 TUSC2O75896 110 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 SCGB1D2O95969 90 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 CELA3BP08861 270 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 ACAA1P09110 424 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-216ENST00000554975 CECR9P0C854 216 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF250P15622 560 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF14P17017 642 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-216ENST00000554975 WNT5AP41221 380 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 NPBWR2P48146 333 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 KCNJ3P48549 501 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 RAB5CP51148 216 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF266Q14584 549 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 PHLDA2Q53GA4 152 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 FAM209AQ5JX71 171 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 FAM74A1Q5RGS3 127 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 HIST2H2BDQ6DRA6 164 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF880Q6PDB4 577 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 VHLLQ6RSH7 139 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 UBAC2Q8NBM4 344 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 MRPL24Q96A35 216 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms