RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	SLC25A19	Q9HC21	320 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	ARMC1	Q9NVT9	282 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	IL20	Q9NYY1	176 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	DNAJC27	Q9NZQ0	273 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF391	Q9UJN7	358 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	VPREB3	Q9UKI3	123 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	CDH10	Q9Y6N8	788 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	IGKV1D-17	A0A075B6S4	117 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956		A0A1B0GVI7	797 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	FAM183A	A6NL82	134 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF850	A8MQ14	1090 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956		H3BUX3	64 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	NDUFB3	O43676	98 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	SOX14	O95416	240 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	FBP1	P09467	338 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	GSTT2	P0CG29	244 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	GSTT2B	P0CG30	244 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	HSD17B1	P14061	328 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	MUC1	P15941	1255 aa	Predicted RBP	3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	ATP6V1B2	P21281	511 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	FMO3	P31513	532 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	TGFBR2	P37173	567 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	CX3CR1	P49238	355 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	RAB13	P51153	203 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	SLC25A1	P53007	311 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	HCCS	P53701	268 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	TATDN3	Q17R31	274 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	TEX30	Q5JUR7	227 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	STEAP1B	Q6NZ63	245 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	SPERT	Q8NA61	448 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNRF1	Q8ND25	227 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR6K6	Q8NGW6	343 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR2T4	Q8NH00	348 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR8S1	Q8NH09	359 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	RNF133	Q8WVZ7	376 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR5P3	Q8WZ94	311 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	H1FX	Q92522	213 aa	Known RBP	3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	RASL10A	Q92737	203 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	DUS3L	Q96G46	650 aa	Known RBP	3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	TSSK6	Q9BXA6	273 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	PARL	Q9H300	379 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	IL1RAP	Q9NPH3	570 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	C19orf12	Q9NSK7	152 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF222	Q9UK12	451 aa		3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	SAMD4A	Q9UPU9	718 aa	Known RBP	3.94	□□□□□ -1.78
PSMC6-208	ENST00000554956	IGHV3-38	A0A0C4DH36	116 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF878	C9JN71	531 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956		H0Y8G0	127 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956		H3BTX0	84 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	TNFRSF11B	O00300	401 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	XRCC2	O43543	280 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	CCDC22	O60826	627 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	CST4	P01036	141 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	FABP3	P05413	133 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	CD28	P10747	220 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	PSG2	P11465	335 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	CCL3L1	P16619	93 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	DDOST	P39656	456 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	MAGEA2	P43356	314 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	KIR2DS4	P43632	304 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	CEBPD	P49716	269 aa	Predicted RBP	3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	UBE2E1	P51965	193 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	SMIM11A	P58511	58 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	PRDX4	Q13162	271 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	KIAA0141	Q14154	515 aa	Predicted RBP	3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	EIF2B1	Q14232	305 aa	Known RBP	3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	HERPUD1	Q15011	391 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	LRRC10	Q5BKY1	277 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	TTC23	Q5W5X9	447 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	RASSF6	Q6ZTQ3	369 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	SLC36A1	Q7Z2H8	476 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	TMEM179B	Q7Z7N9	219 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	ERI1	Q8IV48	349 aa	Known RBP	3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	MKX	Q8IYA7	352 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	CD177	Q8N6Q3	437 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	BBS1	Q8NFJ9	593 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR8B12	Q8NGG6	310 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR8J1	Q8NGP2	316 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR6N2	Q8NGY6	317 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	NPRL2	Q8WTW4	380 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	PIGC	Q92535	297 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	C12orf43	Q96C57	262 aa	Known RBP	3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF488	Q96MN9	340 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	NIPSNAP1	Q9BPW8	284 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR51I2	Q9H344	312 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	METTL8	Q9H825	291 aa	Known RBP	3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	YY1AP1	Q9H869	796 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF702P	Q9H963	129 aa		3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	NOP16	Q9Y3C1	178 aa	Known RBP	3.93	□□□□□ -1.78
PSMC6-208	ENST00000554956	DOCK11	Q5JSL3	2073 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR2AT4	A6NND4	320 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956		M0R1W7	72 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	NDUFAB1	O14561	156 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	SYNGR1	O43759	233 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	ANGPTL7	O43827	346 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	SRSF10	O75494	262 aa	Known RBP	3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	CCNB2	O95067	398 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	COX7A1	P24310	79 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	IFNGR2	P38484	337 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	NAA10	P41227	235 aa	Predicted RBP	3.92	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms