RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ZNF747Q9BV97 191 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 C16orf95Q9H693 158 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 JPT1Q9UK76 154 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 AMMECR1Q9Y4X0 333 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-214ENST00000554928 MMP24Q9Y5R2 645 aa9.88□□□□□ -0.83
SYNE2-214ENST00000554928 IGHV1-3A0A0C4DH29 117 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 METTL21EPA6NDL7 271 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 OOSP1A8MZH6 123 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 SSX5O60225 188 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 GABARAPO95166 117 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 AMY1AP04745 511 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 AMY2AP04746 511 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 GSTT2P0CG29 244 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 GSTT2BP0CG30 244 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 OR3A3P47888 321 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 ZNF816Q0VGE8 651 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-214ENST00000554928 HNF4GQ14541 408 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 ZNF260Q3ZCT1 412 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 MOB1BQ7L9L4 216 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 ANKRD13BQ86YJ7 626 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 LYG1Q8N1E2 194 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 NUDCD2Q8WVJ2 157 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 RTN4IP1Q8WWV3 396 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-214ENST00000554928 CREB3L1Q96BA8 519 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 GALMQ96C23 342 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 ABHD14AQ9BUJ0 271 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 IFI27L2Q9H2X8 130 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 RIMS4Q9H426 269 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-214ENST00000554928 BEX1Q9HBH7 125 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 RNF114Q9Y508 228 aa9.87□□□□□ -0.83
SYNE2-214ENST00000554928 TRDCB7Z8K6 153 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 YPEL1O60688 119 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 ZNF137PP52743 207 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 ARFRP1Q13795 201 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 TMEM30BQ3MIR4 351 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 Q3ZCU0 254 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 IGSF11Q5DX21 431 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 MOB3BQ86TA1 216 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 SLC25A46Q96AG3 418 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 YPEL2Q96QA6 119 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 SLC25A33Q9BSK2 321 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 ABRACLQ9P1F3 81 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 SLC23A1Q9UHI7 598 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 ETV7Q9Y603 341 aa9.86□□□□□ -0.83
SYNE2-214ENST00000554928 TRAV18A0A075B6X5 111 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 SERPINE3A8MV23 424 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 FABP7O15540 132 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 IGKV1D-33P01593 117 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 IGKV1-33P01594 117 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 GAPDHP04406 335 aaKnown RBP9.85□□□□□ -0.83
SYNE2-214ENST00000554928 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-214ENST00000554928 BRS3P32247 399 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 CEACAM6P40199 344 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 MNDAP41218 407 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 RANBP1P43487 201 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 KIR2DS4P43632 304 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 RAB7AP51149 207 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 RPL39P5Q59GN2 51 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 CCDC144NLQ6NUI1 221 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 OR8H3Q8N146 312 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 OR4C13Q8NGP0 309 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 ABHD14BQ96IU4 210 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 RBM14Q96PK6 669 aaKnown RBP9.85□□□□□ -0.83
SYNE2-214ENST00000554928 ZNF251Q9BRH9 671 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 MRPL20Q9BYC9 149 aaKnown RBP9.85□□□□□ -0.83
SYNE2-214ENST00000554928 NPFFR1Q9GZQ6 430 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 C11orf54Q9H0W9 315 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-214ENST00000554928 RAB9BQ9NP90 201 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.85□□□□□ -0.83
SYNE2-214ENST00000554928 SERTAD4Q9NUC0 356 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 PITPNC1Q9UKF7 332 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 RNF150Q9ULK6 438 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 SPATA2Q9UM82 520 aa9.85□□□□□ -0.83
SYNE2-214ENST00000554928 CMYA5Q8N3K9 4069 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 POM121CA8CG34 1229 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 PROP1O75360 226 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 OR2F2O95006 317 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 FCER2P06734 321 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 SCAND1P57086 179 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 LINC00205P59089 165 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 HES1Q14469 280 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 SPCS2Q15005 226 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 LY6G6FQ5SQ64 297 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 HACD4Q5VWC8 232 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 STEAP3Q658P3 488 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 GPR141Q7Z602 305 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 TGIF2LXQ8IUE1 241 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 Q8N2B8 174 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 OR2AK2Q8NG84 335 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 C5orf30Q96GV9 206 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 EAF1Q96JC9 268 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-214ENST00000554928 RITA1Q96K30 269 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 NABP2Q9BQ15 211 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 AGMATQ9BSE5 352 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 CABLES2Q9BTV7 478 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 RANBP3Q9H6Z4 567 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-214ENST00000554928 RAB18Q9NP72 206 aa9.84□□□□□ -0.83
SYNE2-214ENST00000554928 TRRAPQ9Y4A5 3859 aa9.83□□□□□ -0.84
SYNE2-214ENST00000554928 A0A1B0GUS0 222 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms