RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CNOT2Q9NZN8 540 aaKnown RBP3.31□□□□□ -1.88
VTI1B-203ENST00000554636 GLS2Q9UI32 602 aa3.31□□□□□ -1.88
VTI1B-203ENST00000554636 PSORS1C1Q9UIG5 152 aa3.31□□□□□ -1.88
VTI1B-203ENST00000554636 PCDHGB5Q9Y5G0 923 aa3.31□□□□□ -1.88
VTI1B-203ENST00000554636 MINOS1-NBL1R4GNA1 71 aa3.31□□□□□ -1.88
VTI1B-203ENST00000554636 NOTCH3Q9UM47 2321 aa3.31□□□□□ -1.88
VTI1B-203ENST00000554636 NOTCH1P46531 2555 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 TRAV8-7A0A075B6U6 113 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 KBTBD11-OT1A0A1B0GTJ5 212 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 A0A1W2PP11 408 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 FUOMA2VDF0 154 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 FAM172BPA6NC97 362 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 EFCAB10A6NFE3 127 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF729A6NN14 1252 aaPredicted RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 LY6LH3BQJ8 138 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 M0QZ24 198 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 DEGS1O15121 323 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 PIN1P1O15428 100 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 PLXNB1O43157 2135 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 IGLV1-47P01700 117 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CD2P06729 351 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CGB3P0DN86 165 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CGB7P0DN87 165 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CDK2P24941 298 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 HTR1DP28221 377 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 BDKRB2P30411 391 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 SSTR5P35346 364 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 PTGFRP43088 359 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 GLP1RP43220 463 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 KCNJ3P48549 501 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 RAB13P51153 203 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 AQP4P55087 323 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 RBM11P57052 281 aaKnown RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 TAS2R43P59537 309 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 PPP3R1P63098 170 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 BDH1Q02338 343 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 SCN1BQ07699 218 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 ST3GAL4Q11206 333 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 DYNC1I2Q13409 638 aaKnown RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 MED21Q13503 144 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 RIPK1Q13546 671 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 IRF3Q14653 427 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 HERPUD1Q15011 391 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 SSX2Q16385 188 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 HLA-DRB5Q30154 266 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 TMEM95Q3KNT9 176 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 Q499Y3 187 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 PAN3Q58A45 887 aaKnown RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 YIF1BQ5BJH7 314 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 C11orf88Q6PI97 169 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 HEPN1Q6WQI6 88 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 AHSA2Q719I0 299 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 RTN4RL2Q86UN3 420 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 SATL1Q86VE3 508 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 LYPD6Q86Y78 171 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 C8orf59Q8N0T1 100 aaPredicted RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 KLHDC1Q8N7A1 406 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 SUMF2Q8NBJ7 301 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 OR13A1Q8NGR1 328 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 NDNFQ8TB73 568 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 SGCDQ92629 289 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 GHSRQ92847 366 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CPNE2Q96FN4 548 aaPredicted RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CYYR1Q96J86 154 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 NR1H4Q96RI1 486 aaPredicted RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 GPER1Q99527 375 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CDCA4Q9BXL8 241 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 FAM192AQ9GZU8 254 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 MMP27Q9H306 513 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 GAL3ST2Q9H3Q3 398 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 LINC00574Q9H8X3 128 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 TMEM138Q9NPI0 162 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 ABCB10Q9NRK6 738 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 CALYQ9NYX4 217 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 OR6C3Q9NZP0 311 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 RCC2Q9P258 522 aaKnown RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 KIF25Q9UIL4 384 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 FOXJ3Q9UPW0 622 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 LSM2Q9Y333 95 aaKnown RBP3.3□□□□□ -1.88
VTI1B-203ENST00000554636 HILPDAQ9Y5L2 63 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 MEGF8Q7Z7M0 2845 aa3.3□□□□□ -1.88
VTI1B-203ENST00000554636 MEIKINA0A087WXM9 373 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 TRAV39A0A0B4J263 110 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 PNMA8CA0A1B0GUJ8 204 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 A0A1W2PPK0 400 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 hDV102S1A0JD36 115 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 TMEM30CPA0ZSE6 113 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 NPIPB11E5RHQ5 1161 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 C15orf65H3BRN8 121 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 GEMIN2O14893 280 aaKnown RBP3.29□□□□□ -1.88
VTI1B-203ENST00000554636 MYL12BO14950 172 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 MAGEB3O15480 346 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 BUB3O43684 328 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 CDK1P06493 297 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 SNRNP70P08621 437 aaKnown RBP3.29□□□□□ -1.88
VTI1B-203ENST00000554636 SERPINA2P20848 420 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF93P35789 620 aaPredicted RBP3.29□□□□□ -1.88
VTI1B-203ENST00000554636 WNT4P56705 351 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 SLC34A1Q06495 639 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 INSL4Q14641 139 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms