RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SF3B5Q9BWJ5 86 aaKnown RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 SCRT1Q9BWW7 348 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 PARD6GQ9BYG4 376 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 RTN4RQ9BZR6 473 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 CTDSP1Q9GZU7 261 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 BANF2Q9H503 90 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 METTL7AQ9H8H3 244 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 SLC2A9Q9NRM0 540 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 LYRM2Q9NU23 88 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 MED29Q9NX70 200 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 KLRF1Q9NZS2 232 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 TINAGQ9UJW2 476 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 DKKL1Q9UK85 242 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 LSM5Q9Y4Y9 91 aaKnown RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 MMP24Q9Y5R2 645 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 HS3ST3B1Q9Y662 390 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM56-RWDD3S4R434 201 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 PCNX1Q96RV3 2341 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 CCDC168Q8NDH2 2452 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 PRRC2CQ9Y520 2896 aaKnown RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 PHF3Q92576 2039 aaKnown RBP5.04□□□□□ -1.6
VPS33B-203ENST00000554264 ABCA2Q9BZC7 2435 aa5.04□□□□□ -1.6
VPS33B-203ENST00000554264 IGKV1-9A0A0C4DH69 117 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 KIR2DS1A0A191URI9 304 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 A0A1W2PPH5 198 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 A6NLC8 198 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 LINC00587B1AMM8 73 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 RPL36A-HNRNPH2H7BZ11 118 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PPP1R2P9O14990 202 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 MPPED1O15442 326 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 TRIAP1O43715 76 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 SOX15O60248 233 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PDCD6O75340 191 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 CLN5O75503 358 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PTBP3O95758 552 aaKnown RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 HEXBP07686 556 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 CST2P09228 141 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 QDPRP09417 244 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 OR8U8P0C7N1 319 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM225BP0DP42 221 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FCGR2AP12318 317 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 SERPINA2P20848 420 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 BMP5P22003 454 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 KIR2DS4P43632 304 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 NKX2-1P43699 371 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 RBP2P50120 134 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 TNFSF10P50591 281 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 CLDN15P56746 228 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FBXW4P57775 412 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FOXL2P58012 376 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 UBE2KP61086 200 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PKIAP61925 76 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 H3F3AP84243 136 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 ADORA2A-AS1P86434 159 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 EWSR1Q01844 656 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 Q0VFX4 171 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 KIR2DS1Q14954 304 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 EXT1Q16394 746 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 AKR1C8PQ5T2L2 129 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FAM27BQ5VT28 67 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM42Q69YG0 159 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 OR2A2Q6IF42 318 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 ADAM5Q6NVV9 412 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 TMPPEQ6ZT21 453 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 ANKRD37Q7Z713 158 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 STX12Q86Y82 276 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FAM219AQ8IW50 185 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 CMTM1Q8IZ96 169 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 H1FOOQ8IZA3 346 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FBXL14Q8N1E6 418 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 METTL27Q8N6F8 245 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FADS6Q8N9I5 356 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 NFAM1Q8NET5 270 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 OR4D5Q8NGN0 318 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 OR5R1Q8NH85 324 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 MRPL24Q96A35 216 aaKnown RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PINX1Q96BK5 328 aaKnown RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 ZNF524Q96C55 264 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 MSI2Q96DH6 328 aaKnown RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 MUCL1Q96DR8 90 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 FOXN4Q96NZ1 517 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PSMG3Q9BT73 122 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-203ENST00000554264 GGACTQ9BVM4 153 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 TMEM222Q9H0R3 208 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PLK3Q9H4B4 646 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 UFSP2Q9NUQ7 469 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 C11orf21Q9P2W6 132 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 SH3BGRL2Q9UJC5 107 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 SLC7A11Q9UPY5 501 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 PIGLQ9Y2B2 252 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 CELSR1Q9NYQ6 3014 aa5.03□□□□□ -1.6
VPS33B-203ENST00000554264 MTORP42345 2549 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 NF1P21359 2839 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 PKDREJQ9NTG1 2253 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 IGKV1D-43A0A0B4J1Z2 117 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 TRDCB7Z8K6 153 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 NPIPA2E9PIF3 369 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 NPIPA3F8WFD2 350 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 H3BQ15 152 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 CLDN34H7C241 214 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms