RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 TRAV24A0A0B4J272 114 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 A0A0G2JMM0 328 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 CTXND1A0A1B0GTU2 59 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 A0A1W2PPB8 328 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 A0A1W2PRS3 328 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SMCO3A2RU48 225 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ANKRD30BLA7E2S9 258 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 CD300LBA8K4G0 201 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF891A8MT65 544 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF727A8MUV8 499 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 KIR3DP1A8MWS1 328 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 C1QTNF9BB2RNN3 333 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 GGCTO75223 188 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 WISP2O76076 250 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF205O95201 554 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 IGKV1-39P01597 117 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 IGKV1-5P01602 117 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 IGLV2-14P01704 120 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TRGC2P03986 189 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 IGKV1D-39P04432 117 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 PFN1P07737 140 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SOD3P08294 240 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TRGC1P0CF51 173 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 GLI4P10075 376 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 MDKP21741 143 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 FGF7P21781 194 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SRP14P37108 136 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 CYB561P49447 251 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 LHX2P50458 406 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ASCL1P50553 236 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 GPM6AP51674 278 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 RAB4BP61018 213 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ERVK11-1P61568 191 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 RAB11AP62491 216 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ARF1P84077 181 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 PLP2Q04941 152 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SSPNQ14714 243 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 JOSD1Q15040 202 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TESK1Q15569 626 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SSX2Q16385 188 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 GABRA6Q16445 453 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 HLA-BQ31612 363 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ACOT6Q3I5F7 207 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 NCR3LG1Q68D85 454 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 OR2T2Q6IF00 324 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SLC25A24Q6NUK1 477 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 CDPF1Q6NVV7 123 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF343Q6P1L6 599 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 Q6P435 159 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SPNS3Q6ZMD2 512 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 NUFIP2Q7Z417 695 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 MRPL52Q86TS9 123 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 YRDCQ86U90 279 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 HAPLN4Q86UW8 402 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TDHQ8IZJ6 230 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 FAM58AQ8N1B3 248 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM217Q8N7C4 229 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 BEND2Q8NDZ0 799 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 OR10D4PQ8NGN7 298 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 RNASE11Q8TAA1 199 aaKnown RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 NEK7Q8TDX7 302 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ABHD5Q8WTS1 349 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM170AQ8WVE7 144 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 FRZBQ92765 325 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 RAB1CQ92928 201 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 NINJ1Q92982 152 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 JSRP1Q96MG2 331 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 CIB3Q96Q77 187 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 IMMP2LQ96T52 175 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 HIST1H2BLQ99880 126 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 FAM173AQ9BQD7 235 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM147Q9BVK8 224 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 RTL8AQ9BWD3 113 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 BCL2L14Q9BZR8 327 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 OR51I2Q9H344 312 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF703Q9H7S9 590 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 AKIRIN1Q9H9L7 192 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 UFSP2Q9NUQ7 469 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 DLL3Q9NYJ7 618 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 PSENENQ9NZ42 101 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 LRFN1Q9P244 771 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 CACNG5Q9UF02 275 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 SZT2Q5T011 3432 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 CACNA1EQ15878 2313 aa4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 ARID1BQ8NFD5 2236 aaPredicted RBP4.45□□□□□ -1.7
TMEM55B-204ENST00000553602 UNC13CQ8NB66 2214 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 ASXL3Q9C0F0 2248 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 COL27A1Q8IZC6 1860 aaPredicted RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TRAV9-1A0A075B6T8 112 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 FAM181BA6NEQ2 426 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM210A6NLX4 147 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 FAM90A9PA6NNJ1 464 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 PPP5D1E7EU14 171 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 SYNGR1O43759 233 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 MPDU1O75352 247 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 SYNGR4O95473 234 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 CER1O95813 267 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 HRASP01112 189 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 GCGP01275 180 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms