RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 STPG2Q8N412 459 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 DTX3Q8N9I9 347 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 OR2T10Q8NGZ9 312 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 S1PR3Q99500 378 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 IFI27L2Q9H2X8 130 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 AURKAIP1Q9NWT8 199 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-206ENST00000553529 GHRLQ9UBU3 117 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 TGP01266 2768 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 SAA2-SAA4A0A096LPE2 208 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 H3BUI4 141 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 SLC17A2O00624 439 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 FGF16O43320 207 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 BPNT1O95861 308 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 MOSP00540 346 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 UBBP0CG47 229 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 SAA2P0DJI9 122 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-206ENST00000553529 CD33P20138 364 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 VEGFCP49767 419 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 DEFB136Q30KP8 78 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 ZNF880Q6PDB4 577 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 KCNG3Q8TAE7 436 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 THRSPQ92748 146 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 ARHGAP5-AS1Q96IT6 56 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 NABP2Q9BQ15 211 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 CHMP1AQ9HD42 196 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-206ENST00000553529 ACOT13Q9NPJ3 140 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 KCNIP1Q9NZI2 227 aa14.33□□□□□ -0.12
SHMT2-206ENST00000553529 TMEM272A0A1B0GTI8 110 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 PF4P02776 101 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 RPLP1P05386 114 aaKnown RBP14.32□□□□□ -0.12
SHMT2-206ENST00000553529 SCTP09683 121 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 CD3GP09693 182 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 ARSBP15848 533 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 IL3RAP26951 378 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 CD1BP29016 333 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 HOXD3P31249 432 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-206ENST00000553529 KRTAP10-11P60412 298 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 RPL23AP62750 156 aaKnown RBP14.32□□□□□ -0.12
SHMT2-206ENST00000553529 RAB11BQ15907 218 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 C2orf76Q3KRA6 126 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 OR2W3Q7Z3T1 314 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 FAM71E2Q8N5Q1 922 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 ABHD14BQ96IU4 210 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 ABCG5Q9H222 651 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 ISYNA1Q9NPH2 558 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 PLEKHJ1Q9NW61 149 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 JPT1Q9UK76 154 aa14.32□□□□□ -0.12
SHMT2-206ENST00000553529 IGKV1-6A0A0C4DH72 117 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 LDLRAD4O15165 306 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 CA11O75493 328 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 GLAP06280 429 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 TBCEQ15813 527 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-206ENST00000553529 MRPL41Q8IXM3 137 aaKnown RBP14.31□□□□□ -0.12
SHMT2-206ENST00000553529 LINC00482Q8N8I6 264 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 MAFIPQ8WZ33 124 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 ZNF251Q9BRH9 671 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 PECRQ9BY49 303 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 KCNK7Q9Y2U2 307 aa14.31□□□□□ -0.12
SHMT2-206ENST00000553529 LANCL1O43813 399 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 YPEL1O60688 119 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 Q3ZCU0 254 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 TRAT1Q6PIZ9 186 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 ZNF833PQ6ZTB9 187 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 ZNF367Q7RTV3 350 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 FAM89BQ8N5H3 189 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 KLHL30-AS1Q8NEE0 82 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 WFDC9Q8NEX5 89 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 FAM3DQ96BQ1 224 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 GALMQ96C23 342 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 YPEL2Q96QA6 119 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 LIN7CQ9NUP9 197 aaKnown RBP14.3□□□□□ -0.12
SHMT2-206ENST00000553529 ZNF107Q9UII5 783 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-206ENST00000553529 ELF5Q9UKW6 265 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-206ENST00000553529 RNF150Q9ULK6 438 aa14.3□□□□□ -0.12
SHMT2-206ENST00000553529 G3V318 75 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 ACTBP60709 375 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 HTD2P86397 168 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 NDPQ00604 133 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 CFHR3Q02985 330 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 MMDQ15546 238 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 CHPT1Q8WUD6 406 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 SLC23A1Q9UHI7 598 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 V9GY05 133 aa14.29□□□□□ -0.12
SHMT2-206ENST00000553529 NUDT19A8MXV4 375 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 PROP1O75360 226 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 HLA-DRB3P79483 266 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 C22orf42Q6IC83 251 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 FAM131AQ6UXB0 335 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 FOXRED2Q8IWF2 684 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-206ENST00000553529 OR2AK2Q8NG84 335 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 MRAPQ8TCY5 172 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 CASTOR1Q8WTX7 329 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 RASL11BQ9BPW5 248 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 VCX3BQ9H321 246 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 Q9N2K0 584 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 NDUFB11Q9NX14 153 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 RAB26Q9ULW5 256 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 FBXO7Q9Y3I1 522 aa14.28□□□□□ -0.12
SHMT2-206ENST00000553529 WSB1Q9Y6I7 421 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms