RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 IZUMO1Q8IYV9 350 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 OR2AK2Q8NG84 335 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 OR8H1Q8NGG4 311 aa12.23□□□□□ -0.45
SHMT2-204ENST00000553324 ITGB1BP1O14713 200 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 FBXO24O75426 580 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 MOSP00540 346 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 AMY1AP04745 511 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 AMY2AP04746 511 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 CD3GP09693 182 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 CD36P16671 472 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 PPP1CCP36873 323 aaKnown RBP12.22□□□□□ -0.45
SHMT2-204ENST00000553324 HNF4GQ14541 408 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 TIMM50Q3ZCQ8 353 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 OR10R2Q8NGX6 335 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 EDARADDQ8WWZ3 215 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 EAF1Q96JC9 268 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-204ENST00000553324 OR51E2Q9H255 320 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 Q9N2K0 584 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 PIPOXQ9P0Z9 390 aa12.22□□□□□ -0.45
SHMT2-204ENST00000553324 NCBP2LA6PVI3 153 aaKnown RBP12.21□□□□□ -0.45
SHMT2-204ENST00000553324 SERPINE3A8MV23 424 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 TRDCB7Z8K6 153 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 HSPA12AO43301 675 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 RRP9O43818 475 aaKnown RBP12.21□□□□□ -0.45
SHMT2-204ENST00000553324 TMEM127O75204 238 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 SCGNO76038 276 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 FAM71F2Q6NXP2 309 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 C5orf56Q8N8D9 126 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 TSPAN14Q8NG11 270 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 WIPF2Q8TF74 440 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-204ENST00000553324 CHCHD6Q9BRQ6 235 aa12.21□□□□□ -0.45
SHMT2-204ENST00000553324 IGHV3-72A0A0B4J1Y9 119 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 RAB27BO00194 218 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 RAB29O14966 203 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 SDC2P34741 201 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 CEACAM6P40199 344 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 SERPINB10P48595 397 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 SCAND1P57086 179 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 HLA-DRB3P79483 266 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 GNMTQ14749 295 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 KIR2DS1Q14954 304 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 NR2C2APQ86WQ0 139 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 NDUFA11Q86Y39 141 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 C11orf44Q8N8P7 122 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 OR5AU1Q8NGC0 362 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 CYYR1Q96J86 154 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 S1PR3Q99500 378 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 HDHD3Q9BSH5 251 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-204ENST00000553324 ATG5Q9H1Y0 275 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 SLC23A1Q9UHI7 598 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 DAPK2Q9UIK4 370 aa12.2□□□□□ -0.46
SHMT2-204ENST00000553324 MGAM2Q2M2H8 2515 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 LOC100506127A0A0U1RQW1 187 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 OPN1MWP04001 364 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 OPN1MW2P0DN77 364 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 OPN1MW3P0DN78 364 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 SLC2A2P11168 524 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-204ENST00000553324 HIST1H1DP16402 221 aaKnown RBP12.19□□□□□ -0.46
SHMT2-204ENST00000553324 GNB3P16520 340 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 TALDO1P37837 337 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 PLA2G7Q13093 441 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 SRSF7Q16629 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHMT2-204ENST00000553324 FBLN7Q53RD9 439 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 SFXN4Q6P4A7 337 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 ZNF833PQ6ZTB9 187 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 C5orf24Q7Z6I8 188 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 Q8N6K4 173 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 OR4A4PQ8NGN8 299 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 RASL11BQ9BPW5 248 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 KCNK7Q9Y2U2 307 aa12.19□□□□□ -0.46
SHMT2-204ENST00000553324 PKD1L1Q8TDX9 2849 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 MFNGO00587 321 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 DIRAS3O95661 229 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 SCTP09683 121 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 CD28P10747 220 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 MOGAT2Q3SYC2 334 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 Q6ZPA2 131 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 CROCCP3Q8IVE0 287 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 FOXRED2Q8IWF2 684 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 ODF3L1Q8IXM7 274 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 CHPT1Q8WUD6 406 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 PHF21AQ96BD5 680 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 LIN7CQ9NUP9 197 aaKnown RBP12.18□□□□□ -0.46
SHMT2-204ENST00000553324 CMYA5Q8N3K9 4069 aa12.18□□□□□ -0.46
SHMT2-204ENST00000553324 A0A0B4J203 849 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 SMIM30A4D0T7 59 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 IGHG2P01859 326 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 MC5RP33032 325 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 PITPNAQ00169 270 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 CD83Q01151 205 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 LSAMPQ13449 338 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 TMEM95Q3KNT9 176 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 SLC35E3Q7Z769 313 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 OR4F17Q8NGA8 305 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms