RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 PTX4Q96A99 478 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 AGMATQ9BSE5 352 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 PARP12Q9H0J9 701 aaKnown RBP15.29■□□□□ 0.04
PTCH1-227ENST00000553256 OR51E2Q9H255 320 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 Q9N2K0 584 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 KCNIP1Q9NZI2 227 aa15.29■□□□□ 0.04
PTCH1-227ENST00000553256 TET2Q6N021 2002 aaPredicted RBP15.28■□□□□ 0.04
PTCH1-227ENST00000553256 IGHV3-72A0A0B4J1Y9 119 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 IGKV1-6A0A0C4DH72 117 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 MFNGO00587 321 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 RAB6AP20340 208 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 ZNF833PQ6ZTB9 187 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 OR56B1Q8NGI3 324 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 GALMQ96C23 342 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 ABHD14AQ9BUJ0 271 aa15.28■□□□□ 0.04
PTCH1-227ENST00000553256 TRIM64CA6NLI5 447 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 ITGB1BP1O14713 200 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 LPLP06858 475 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 SLC2A2P11168 524 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-227ENST00000553256 TMEM11P17152 192 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 MYL9P24844 172 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 C2orf68Q2NKX9 166 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 C10orf99Q6UWK7 81 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 MOB3BQ86TA1 216 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 Q8N9W7 124 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 TOLLIPQ9H0E2 274 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 RNF167Q9H6Y7 350 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 C12orf4Q9NQ89 552 aa15.27■□□□□ 0.04
PTCH1-227ENST00000553256 NOTOA8MTQ0 251 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 TXNL1O43396 289 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 PROP1O75360 226 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 FBXO24O75426 580 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 IGHG2P01859 326 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 IL3RAP26951 378 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 HLA-DRB3P79483 266 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 HNF4GQ14541 408 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 TPRA1Q86W33 373 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 TGIF2LXQ8IUE1 241 aa15.26■□□□□ 0.03
PTCH1-227ENST00000553256 CITED2Q99967 270 aaPredicted RBP15.26■□□□□ 0.03
PTCH1-227ENST00000553256 SMIM30A4D0T7 59 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 SCTP09683 121 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 RANBP1P43487 201 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 LSAMPQ13449 338 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 LYG1Q8N1E2 194 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 FAM71E2Q8N5Q1 922 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 OR10R2Q8NGX6 335 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 NABP2Q9BQ15 211 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 OR1A1Q9P1Q5 309 aa15.25■□□□□ 0.03
PTCH1-227ENST00000553256 SAA2-SAA4A0A096LPE2 208 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 LINC01548A6NM66 108 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 CSF1P09603 554 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 SAA2P0DJI9 122 aaPredicted RBP15.24■□□□□ 0.03
PTCH1-227ENST00000553256 GADD45AP24522 165 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 OR3A3P47888 321 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 NDUFA11Q86Y39 141 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 OR5AU1Q8NGC0 362 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 OR2T10Q8NGZ9 312 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 RITA1Q96K30 269 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 CENPOQ9BU64 300 aa15.24■□□□□ 0.03
PTCH1-227ENST00000553256 MRPL20Q9BYC9 149 aaKnown RBP15.24■□□□□ 0.03
PTCH1-227ENST00000553256 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTCH1-227ENST00000553256 RGS11O94810 467 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 MOSP00540 346 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 CLEC2LP0C7M8 214 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 HIST1H1DP16402 221 aaKnown RBP15.23■□□□□ 0.03
PTCH1-227ENST00000553256 SDC2P34741 201 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 F2RL1P55085 397 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 HES1Q14469 280 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 NEDD8Q15843 81 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 FAM71F2Q6NXP2 309 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 RAB3CQ96E17 227 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 CMSS1Q9BQ75 279 aaKnown RBP15.23■□□□□ 0.03
PTCH1-227ENST00000553256 ABCG5Q9H222 651 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 CHMP1AQ9HD42 196 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-227ENST00000553256 ABRACLQ9P1F3 81 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 SLC23A1Q9UHI7 598 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 ELF5Q9UKW6 265 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-227ENST00000553256 MGAT4AQ9UM21 535 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 SSR3Q9UNL2 185 aa15.23■□□□□ 0.03
PTCH1-227ENST00000553256 ST8SIA5O15466 376 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 OPN1MWP04001 364 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 FCGR3AP08637 254 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 OPN1MW2P0DN77 364 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 OPN1MW3P0DN78 364 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 GNB3P16520 340 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 CD36P16671 472 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 SFXN4Q6P4A7 337 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 Q6ZS49 121 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 OR2AK2Q8NG84 335 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 FAM110DQ8TAY7 271 aaPredicted RBP15.22■□□□□ 0.03
PTCH1-227ENST00000553256 IL1F10Q8WWZ1 152 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 YIPF6Q96EC8 236 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 S1PR3Q99500 378 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 CHCHD6Q9BRQ6 235 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 CABLES2Q9BTV7 478 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 C11orf54Q9H0W9 315 aaPredicted RBP15.22■□□□□ 0.03
PTCH1-227ENST00000553256 LIN7CQ9NUP9 197 aaKnown RBP15.22■□□□□ 0.03
PTCH1-227ENST00000553256 NOTCH3Q9UM47 2321 aa15.22■□□□□ 0.03
PTCH1-227ENST00000553256 TRDCB7Z8K6 153 aa15.21■□□□□ 0.03
PTCH1-227ENST00000553256 CT45A6P0DMU7 189 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms