RNA–Protein interactions for RNA: ENST00000553182.5

DDX23-218, Transcript of DEAD-box helicase 23, human

TSL 3

Gene DDX23, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-218	ENST00000553182	LSM4	Q9Y4Z0	139 aa	Known RBP	11.12	□□□□□ -0.63
DDX23-218	ENST00000553182	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	PNMA8C	A0A1B0GUJ8	204 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	NBR2	O15453	112 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	ECI1	P42126	302 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	GLT8D1	Q68CQ7	371 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	ZNF833P	Q6ZTB9	187 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	ODF3L1	Q8IXM7	274 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	NANOGP1	Q8N7R0	232 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	NPB	Q8NG41	125 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	OR2AK2	Q8NG84	335 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	OR52L2P	Q8NGH6	319 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	MRPL30	Q8TCC3	161 aa	Known RBP	11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	NABP2	Q9BQ15	211 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	OR51J1	Q9H342	316 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	PIPOX	Q9P0Z9	390 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	KIAA1456	Q9P272	454 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	SCOC	Q9UIL1	159 aa		11.11	□□□□□ -0.63
DDX23-218	ENST00000553182	RAB29	O14966	203 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	IGLV1-40	P01703	118 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	SLC2A2	P11168	524 aa	Predicted RBP	11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	MC5R	P33032	325 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	LUM	P51884	338 aa	Predicted RBP	11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	ZNF616	Q08AN1	781 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	C5orf64	Q2M2E5	130 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	ZNF260	Q3ZCT1	412 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	ACSM3	Q53FZ2	586 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	C6orf141	Q5SZD1	244 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	RNLS	Q5VYX0	342 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	TCTEX1D1	Q8N7M0	179 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	ZNF491	Q8N8L2	437 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	OR1N2	Q8NGR9	330 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	KCNG3	Q8TAE7	436 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	FBLIM1	Q8WUP2	373 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	PHYHIP	Q92561	330 aa		11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	RIMS4	Q9H426	269 aa	Predicted RBP	11.1	□□□□□ -0.63
DDX23-218	ENST00000553182	IGHV7-81	A0A0B4J1V7	117 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	TRAV41	A0A0B4J266	112 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182		I3L521	148 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	ITGB1BP1	O14713	200 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	BPNT1	O95861	308 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	MYF6	P23409	242 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	CHAT	P28329	748 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	PPP1CC	P36873	323 aa	Known RBP	11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	RANBP1	P43487	201 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	RAB9A	P51151	201 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	GNMT	Q14749	295 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	HMGN3	Q15651	99 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	NKAPL	Q5M9Q1	402 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	C1orf100	Q5SVJ3	147 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	AHSA2	Q719I0	299 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	ZNF429	Q86V71	674 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	BPIFB6	Q8NFQ5	453 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	FAM46B	Q96A09	425 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	RNF5	Q99942	180 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	MRPL20	Q9BYC9	149 aa	Known RBP	11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	ANKRD60	Q9BZ19	345 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	WSB1	Q9Y6I7	421 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182		U3KQK5	164 aa		11.09	□□□□□ -0.63
DDX23-218	ENST00000553182	COL7A1	Q02388	2944 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	ATP6V0E1	O15342	81 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	NDUFA3	O95167	84 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	RPS27A	P62979	156 aa	Known RBP	11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	KIAA0141	Q14154	515 aa	Predicted RBP	11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	FAM27D1	Q5T7N8	215 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	MOB1B	Q7L9L4	216 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	MINDY2	Q8NBR6	621 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	SULT4A1	Q9BR01	284 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	FAAP24	Q9BTP7	215 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	MND1	Q9BWT6	205 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	TM2D1	Q9BX74	207 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	TMEM59	Q9BXS4	323 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	KLK15	Q9H2R5	256 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	VCX	Q9H320	206 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	PARP11	Q9NR21	331 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	FKBP14	Q9NWM8	211 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	RNF150	Q9ULK6	438 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	MGAT4A	Q9UM21	535 aa		11.08	□□□□□ -0.64
DDX23-218	ENST00000553182	SAA2-SAA4	A0A096LPE2	208 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	OR5H14	A6NHG9	310 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182		G3V318	75 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	RBBP9	O75884	186 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	SAA2	P0DJI9	122 aa	Predicted RBP	11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	VSIG8	P0DPA2	414 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	CD37	P11049	281 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	SRM	P19623	302 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	CRIP2	P52943	208 aa	Predicted RBP	11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	LAIR2	Q6ISS4	152 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	PYHIN1	Q6K0P9	492 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	ZNF880	Q6PDB4	577 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	IL1F10	Q8WWZ1	152 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	RITA1	Q96K30	269 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	PRR25	Q96S07	402 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	URM1	Q9BTM9	101 aa	Known RBP	11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	PLEKHJ1	Q9NW61	149 aa		11.07	□□□□□ -0.64
DDX23-218	ENST00000553182	SLC23A1	Q9UHI7	598 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms