RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, human

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-209	ENST00000552162	ORC6	Q9Y5N6	252 aa		12.53	□□□□□ -0.4
RAB5C-209	ENST00000552162	ALMS1	Q8TCU4	4167 aa		12.52	□□□□□ -0.4
RAB5C-209	ENST00000552162	TNC	P24821	2201 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	ALPL	P05186	524 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	ARSB	P15848	533 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	PPP1CC	P36873	323 aa	Known RBP	12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	HAGH	Q16775	308 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	PYHIN1	Q6K0P9	492 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	ZNF833P	Q6ZTB9	187 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	OR52L2P	Q8NGH6	319 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	ABHD5	Q8WTS1	349 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	ZNF184	Q99676	751 aa	Predicted RBP	12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	TAF9B	Q9HBM6	251 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	JPT1	Q9UK76	154 aa		12.52	□□□□□ -0.41
RAB5C-209	ENST00000552162	SAA2-SAA4	A0A096LPE2	208 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	IFNA6	P05013	189 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	SAA2	P0DJI9	122 aa	Predicted RBP	12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	OR3A3	P47888	321 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	TPPP2	P59282	170 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	CX3CL1	P78423	397 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	RIPK1	Q13546	671 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	GPR176	Q14439	515 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	ZIK1	Q3SY52	487 aa	Predicted RBP	12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	C1orf146	Q5VVC0	180 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	XAF1	Q6GPH4	301 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	ORAI1	Q96D31	301 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	MS4A10	Q96PG2	267 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	FBXL15	Q9H469	300 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	AMBN	Q9NP70	447 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	NUBP2	Q9Y5Y2	271 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	PEX16	Q9Y5Y5	336 aa		12.51	□□□□□ -0.41
RAB5C-209	ENST00000552162	EI24	O14681	340 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	ARPC1B	O15143	372 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	CA11	O75493	328 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	SC5D	O75845	299 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	EGR2	P11161	476 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	GABRB1	P18505	474 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	RAB40B	Q12829	278 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	PLGLA	Q15195	96 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	ACTBL2	Q562R1	376 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	CD200R1L	Q6Q8B3	271 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	FAM131A	Q6UXB0	335 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	C5orf24	Q7Z6I8	188 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	MRPS24	Q96EL2	167 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	FAM103A1	Q9BTL3	118 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	MBNL3	Q9NUK0	354 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	KCNIP1	Q9NZI2	227 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	RNF150	Q9ULK6	438 aa		12.5	□□□□□ -0.41
RAB5C-209	ENST00000552162	RRH	O14718	337 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	CCDC58	Q4VC31	144 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	RPL22L1	Q6P5R6	122 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	UNQ5815/PRO19632	Q6UWF5	114 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	PPP1R27	Q86WC6	154 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	OR52I1	Q8NGK6	324 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	CYYR1	Q96J86	154 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	RHOV	Q96L33	236 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	CNOT2	Q9NZN8	540 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	GAB2	Q9UQC2	676 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	GMPPB	Q9Y5P6	360 aa		12.49	□□□□□ -0.41
RAB5C-209	ENST00000552162	PLEC	Q15149	4684 aa	Known RBP	12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	UBE2QL1	A1L167	161 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	FCN1	O00602	326 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	YPEL1	O60688	119 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	RGS11	O94810	467 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	MAS1	P04201	325 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	LIMS3	P0CW19	117 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	LIMS4	P0CW20	117 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	IGFBP3	P17936	291 aa	Predicted RBP	12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	CD40LG	P29965	261 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	HTD2	P86397	168 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	GLIPR1L1	Q6UWM5	242 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	ZNF554	Q86TJ5	538 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	OR2AK2	Q8NG84	335 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	OR13C5	Q8NGS8	318 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	MRPL30	Q8TCC3	161 aa	Known RBP	12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	MUL1	Q969V5	352 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162		Q96MT0	163 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	YPEL2	Q96QA6	119 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	SLA2	Q9H6Q3	261 aa		12.48	□□□□□ -0.41
RAB5C-209	ENST00000552162	FAM90A7P	A6NKC0	464 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	FAM90A23P	A8MXZ1	464 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	TRGV3	P03979	118 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	ZP3	P21754	424 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	AKIRIN2	Q53H80	203 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	LY6G6F	Q5SQ64	297 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	FAM71F2	Q6NXP2	309 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	LFNG	Q8NES3	379 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	IL17D	Q8TAD2	202 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	GALM	Q96C23	342 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	TMED9	Q9BVK6	235 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	KRTAP17-1	Q9BYP8	105 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	SELENOI	Q9C0D9	397 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	IFI27L2	Q9H2X8	130 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	BANF2	Q9H503	90 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	TUBA4B	Q9H853	241 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	RETN	Q9HD89	108 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	CKLF	Q9UBR5	152 aa		12.47	□□□□□ -0.41
RAB5C-209	ENST00000552162	TRAV8-7	A0A075B6U6	113 aa		12.46	□□□□□ -0.41

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