RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 OR10H4Q8NGA5 316 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 NEK7Q8TDX7 302 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 TNFAIP8L1Q8WVP5 186 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 ABHD14AQ9BUJ0 271 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 TEX12Q9BXU0 123 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 FAM192AQ9GZU8 254 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 ZC4H2Q9NQZ6 224 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 ST3GAL6Q9Y274 331 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 SAA2-SAA4A0A096LPE2 208 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 SPINT2O43291 252 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 SULT1C4O75897 302 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 CDRT1O95170 752 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 CST1P01037 141 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 SAA2P0DJI9 122 aaPredicted RBP10.72□□□□□ -0.69
VPS29-209ENST00000551655 CTRB1P17538 263 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 ATF4P18848 351 aaPredicted RBP10.72□□□□□ -0.69
VPS29-209ENST00000551655 ZNF85Q03923 595 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 ALKBH1Q13686 389 aaKnown RBP10.72□□□□□ -0.69
VPS29-209ENST00000551655 MORN2Q502X0 79 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 SYT6Q5T7P8 510 aaPredicted RBP10.72□□□□□ -0.69
VPS29-209ENST00000551655 NXNL2Q5VZ03 156 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 CTRB2Q6GPI1 263 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 SLC16A13Q7RTY0 426 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 KCTD20Q7Z5Y7 419 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 PXT1Q8NFP0 134 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 CACNG8Q8WXS5 425 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 RNF183Q96D59 192 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 ZNF556Q9HAH1 456 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 OR2S2Q9NQN1 319 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 NDE1Q9NXR1 346 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 H2AFY2Q9P0M6 372 aaPredicted RBP10.72□□□□□ -0.69
VPS29-209ENST00000551655 METTL1Q9UBP6 276 aaKnown RBP10.72□□□□□ -0.69
VPS29-209ENST00000551655 TRAPPC2LQ9UL33 140 aa10.72□□□□□ -0.69
VPS29-209ENST00000551655 BMPR1BO00238 502 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 RCC1P18754 421 aaPredicted RBP10.71□□□□□ -0.69
VPS29-209ENST00000551655 KIR2DS2P43631 304 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 CRISP1P54107 249 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 RBM11P57052 281 aaKnown RBP10.71□□□□□ -0.69
VPS29-209ENST00000551655 SSBP2P81877 361 aaPredicted RBP10.71□□□□□ -0.69
VPS29-209ENST00000551655 RSU1Q15404 277 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 MRPS24Q96EL2 167 aaKnown RBP10.71□□□□□ -0.69
VPS29-209ENST00000551655 IL4I1Q96RQ9 567 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 APLNQ9ULZ1 77 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.69
VPS29-209ENST00000551655 SULT1B1O43704 296 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 ISG15P05161 165 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 FOLR2P14207 255 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 FXYD3Q14802 87 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 PTGES3Q15185 160 aaKnown RBP10.7□□□□□ -0.7
VPS29-209ENST00000551655 PSG5Q15238 335 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 FAM98BQ52LJ0 330 aaKnown RBP10.7□□□□□ -0.7
VPS29-209ENST00000551655 Q6ZWC4 215 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 TMEM61Q8N0U2 210 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 GVQW1Q8N7I0 195 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 MAPKAPK5-AS1Q8N8E1 139 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 OR51A2Q8NGJ7 313 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 OR52B4Q8NGK2 314 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 IFT22Q9H7X7 185 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 ING4Q9UNL4 249 aa10.7□□□□□ -0.7
VPS29-209ENST00000551655 UBR4Q5T4S7 5183 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 LRP1BQ9NZR2 4599 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 A0A1W2PP11 408 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 H3BUA1 57 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 LCE2BO14633 110 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 AIREO43918 545 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 SCAF4O95104 1147 aaKnown RBP10.69□□□□□ -0.7
VPS29-209ENST00000551655 FADS2O95864 444 aaKnown RBP10.69□□□□□ -0.7
VPS29-209ENST00000551655 GSTP1P09211 210 aaKnown RBP10.69□□□□□ -0.7
VPS29-209ENST00000551655 OR2T7P0C7T2 308 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 APELAP0DMC3 54 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 EFNB1P98172 346 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 RPL39P5Q59GN2 51 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 STEAP3Q658P3 488 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 FAM220AQ7Z4H9 259 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 DEFB107AQ8IZN7 70 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 TMEM217Q8N7C4 229 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 TMEM163Q8TC26 289 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 GPER1Q99527 375 aa10.69□□□□□ -0.7
VPS29-209ENST00000551655 TINAGL1Q9GZM7 467 aaPredicted RBP10.69□□□□□ -0.7
VPS29-209ENST00000551655 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
VPS29-209ENST00000551655 H7C2Y5 167 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 M0R2N4 97 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 HLA-AP01891 365 aaKnown RBP10.68□□□□□ -0.7
VPS29-209ENST00000551655 CT45A6P0DMU7 189 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 CT45A5P0DMU8 189 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 CT45A7P0DMV0 189 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 AADACP22760 399 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 EPHA2P29317 976 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 PRDX6P30041 224 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 RBMS2Q15434 407 aaKnown RBP10.68□□□□□ -0.7
VPS29-209ENST00000551655 TM4SF20Q53R12 229 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 OR52N1Q8NH53 320 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 C2CD4CQ8TF44 421 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 FBLIM1Q8WUP2 373 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 SNAPC3Q92966 411 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 IFI27L2Q9H2X8 130 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms