RNA–Protein interactions for RNA: ENST00000551098.5

DDX23-208, Transcript of DEAD-box helicase 23, human

TSL 2

Gene DDX23, Length 1,083 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-208	ENST00000551098	NICN1	Q9BSH3	213 aa		13.74	□□□□□ -0.21
DDX23-208	ENST00000551098	TM2D1	Q9BX74	207 aa		13.74	□□□□□ -0.21
DDX23-208	ENST00000551098	ZFP57	Q9NU63	452 aa		13.74	□□□□□ -0.21
DDX23-208	ENST00000551098	STEAP1	Q9UHE8	339 aa		13.74	□□□□□ -0.21
DDX23-208	ENST00000551098	AK6	Q9Y3D8	172 aa	Known RBP	13.74	□□□□□ -0.21
DDX23-208	ENST00000551098	CD37	P11049	281 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	CALR	P27797	417 aa	Known RBP	13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	RANBP1	P43487	201 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	MAP2K4	P45985	399 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	RPL23A	P62750	156 aa	Known RBP	13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	RAB11B	Q15907	218 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	TEX38	Q6PEX7	206 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	OR2AK2	Q8NG84	335 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	PLSCR3	Q9NRY6	295 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	BLOC1S6	Q9UL45	172 aa		13.73	□□□□□ -0.21
DDX23-208	ENST00000551098	SLC17A2	O00624	439 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	RRP9	O43818	475 aa	Known RBP	13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	SOX6	P35712	828 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	F2RL1	P55085	397 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	QRFP	P83859	136 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	LSAMP	Q13449	338 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	HMGN3	Q15651	99 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	PNLIPRP3	Q17RR3	467 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	FOXB2	Q5VYV0	432 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	OR2W3	Q7Z3T1	314 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	MRAP	Q8TCY5	172 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	RCC1L	Q96I51	464 aa	Known RBP	13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	RIMS4	Q9H426	269 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	ACOT13	Q9NPJ3	140 aa		13.72	□□□□□ -0.21
DDX23-208	ENST00000551098	SOCS1	O15524	211 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	DUS4L	O95620	317 aa	Known RBP	13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	PSMD7	P51665	324 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	FABP5	Q01469	135 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	MMD	Q15546	238 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	LY6G6F	Q5SQ64	297 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	MOB1B	Q7L9L4	216 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	KLHL30-AS1	Q8NEE0	82 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	RBMXL1	Q96E39	390 aa	Known RBP	13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	LPAR5	Q9H1C0	372 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	NOTCH3	Q9UM47	2321 aa		13.71	□□□□□ -0.21
DDX23-208	ENST00000551098	NAPSA	O96009	420 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	SLC6A1	P30531	599 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	OR3A3	P47888	321 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX23-208	ENST00000551098		Q6ZPA2	131 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	C8orf86	Q6ZUL3	223 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	SVOP	Q8N4V2	548 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	FAM71E2	Q8N5Q1	922 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	GFI1	Q99684	422 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	ZNF251	Q9BRH9	671 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	MRPL20	Q9BYC9	149 aa	Known RBP	13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX23-208	ENST00000551098	AK3	Q9UIJ7	227 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098		V9GY05	133 aa		13.7	□□□□□ -0.22
DDX23-208	ENST00000551098		A0A0A6YYD4	124 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	SLC2A2	P11168	524 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	VDAC1	P21796	283 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	VEGFC	P49767	419 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	CLDN12	P56749	244 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	ACTB	P60709	375 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	ZNF367	Q7RTV3	350 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	ZNF695	Q8IW36	515 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	MRPL41	Q8IXM3	137 aa	Known RBP	13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	ODF3L1	Q8IXM7	274 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	FAM89B	Q8N5H3	189 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	FAM3D	Q96BQ1	224 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	NABP2	Q9BQ15	211 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	HSPB9	Q9BQS6	159 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	ZNF107	Q9UII5	783 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	HSF4	Q9ULV5	492 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	MGAT4A	Q9UM21	535 aa		13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	PRKDC	P78527	4128 aa	Known RBP	13.69	□□□□□ -0.22
DDX23-208	ENST00000551098	SAA2-SAA4	A0A096LPE2	208 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	PDCD5	O14737	125 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	RAB29	O14966	203 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	ST8SIA5	O15466	376 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	HSPA12A	O43301	675 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	SAA2	P0DJI9	122 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	MYCNOS	P40205	109 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	THBS3	P49746	956 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	TBCE	Q15813	527 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	C2orf76	Q3KRA6	126 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	ZNF880	Q6PDB4	577 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	ZNF833P	Q6ZTB9	187 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	C18orf65	Q6ZTR6	163 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	LINC00482	Q8N8I6	264 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	OR56B1	Q8NGI3	324 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	GPR61	Q9BZJ8	451 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	PIPOX	Q9P0Z9	390 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	SLC23A1	Q9UHI7	598 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	RAB26	Q9ULW5	256 aa		13.68	□□□□□ -0.22
DDX23-208	ENST00000551098	TRBV6-6	A0A0A6YYG2	114 aa		13.67	□□□□□ -0.22
DDX23-208	ENST00000551098	DENR	O43583	198 aa	Known RBP	13.67	□□□□□ -0.22
DDX23-208	ENST00000551098	RPLP1	P05386	114 aa	Known RBP	13.67	□□□□□ -0.22
DDX23-208	ENST00000551098	ZBTB25	P24278	435 aa		13.67	□□□□□ -0.22
DDX23-208	ENST00000551098	CEACAM6	P40199	344 aa		13.67	□□□□□ -0.22
DDX23-208	ENST00000551098	MRPS15	P82914	257 aa	Known RBP	13.67	□□□□□ -0.22
DDX23-208	ENST00000551098	FOXE3	Q13461	319 aa		13.67	□□□□□ -0.22
DDX23-208	ENST00000551098	HES5	Q5TA89	166 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms