RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 TBX5Q99593 518 aa0.96□□□□□ -2.26
GPN3-209ENST00000551079 MGLLQ99685 303 aa0.96□□□□□ -2.26
GPN3-209ENST00000551079 C11orf1Q9H5F2 150 aa0.96□□□□□ -2.26
GPN3-209ENST00000551079 TMEM216Q9P0N5 145 aa0.96□□□□□ -2.26
GPN3-209ENST00000551079 MRPS16Q9Y3D3 137 aaKnown RBP0.96□□□□□ -2.26
GPN3-209ENST00000551079 PLCH2O75038 1416 aa0.96□□□□□ -2.26
GPN3-209ENST00000551079 NOTCH1P46531 2555 aa0.96□□□□□ -2.26
GPN3-209ENST00000551079 NDUFS8O00217 210 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 UBFD1O14562 309 aaKnown RBP0.95□□□□□ -2.26
GPN3-209ENST00000551079 GPR171O14626 319 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 LDOC1O95751 146 aaPredicted RBP0.95□□□□□ -2.26
GPN3-209ENST00000551079 CCDC172P0C7W6 258 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 ESDP10768 282 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 CCL2P13500 99 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 PPP1CCP36873 323 aaKnown RBP0.95□□□□□ -2.26
GPN3-209ENST00000551079 DYNLL1P63167 89 aaKnown RBP0.95□□□□□ -2.26
GPN3-209ENST00000551079 TNNC1P63316 161 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 CENPWQ5EE01 88 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 AGTRAPQ6RW13 159 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 OR4X2Q8NGF9 303 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 MED18Q9BUE0 208 aa0.95□□□□□ -2.26
GPN3-209ENST00000551079 NYNRINQ9P2P1 1898 aaKnown RBP0.95□□□□□ -2.26
GPN3-209ENST00000551079 FN1P02751 2386 aaKnown RBP0.94□□□□□ -2.26
GPN3-209ENST00000551079 DENND4BO75064 1496 aaPredicted RBP0.94□□□□□ -2.26
GPN3-209ENST00000551079 DSCAML1Q8TD84 2053 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 TRGV2A0A075B6R0 118 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 GRIFINA4D1Z8 144 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 EFCAB9A8MZ26 197 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 PHYHO14832 338 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 SNAP29O95721 258 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 NAPSAO96009 420 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 PSMB3P49720 205 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 HINT1P49773 126 aaPredicted RBP0.94□□□□□ -2.26
GPN3-209ENST00000551079 SULT1A2P50226 295 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 EMP2P54851 167 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 TSPEAR-AS2P59090 65 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 FGF12P61328 243 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 GTF2BQ00403 316 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 TRMT12Q53H54 448 aaKnown RBP0.94□□□□□ -2.26
GPN3-209ENST00000551079 SLC35F6Q8N357 371 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 C10orf126Q8N4M7 172 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 OR4P4Q8NGL7 312 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 MSANTD3Q96H12 275 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 HBEGFQ99075 208 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 TIMM21Q9BVV7 248 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 MRPL32Q9BYC8 188 aaKnown RBP0.94□□□□□ -2.26
GPN3-209ENST00000551079 CHST5Q9GZS9 411 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 METTL17Q9H7H0 456 aaPredicted RBP0.94□□□□□ -2.26
GPN3-209ENST00000551079 COMMD9Q9P000 198 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 FBN2P35556 2912 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 KDM5BQ9UGL1 1544 aa0.94□□□□□ -2.26
GPN3-209ENST00000551079 IGHV3-15A0A0B4J1V0 119 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 LINC00862A6NCI5 91 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 TMEM235A6NFC5 223 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 J3QQQ9 107 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 GNRH2O43555 120 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 SGCEO43556 437 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 UGT2B11O75310 529 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 NQO2P16083 231 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 CDK2P24941 298 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 ATP6V0CP27449 155 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 PEBP1P30086 187 aaKnown RBP0.93□□□□□ -2.26
GPN3-209ENST00000551079 OPRM1P35372 400 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 RPL26P61254 145 aaKnown RBP0.93□□□□□ -2.26
GPN3-209ENST00000551079 FAM201AQ5SY85 155 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.93□□□□□ -2.26
GPN3-209ENST00000551079 Q6ZTI0 123 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 C2orf91Q6ZV80 131 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 GLT6D1Q7Z4J2 308 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 DOLPP1Q86YN1 238 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 FNDC9Q8TBE3 224 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 TAMM41Q96BW9 452 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 NAA38Q9BRA0 125 aaKnown RBP0.93□□□□□ -2.26
GPN3-209ENST00000551079 UGT2B28Q9BY64 529 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 DOK5Q9P104 306 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 MRM2Q9UI43 246 aaKnown RBP0.93□□□□□ -2.26
GPN3-209ENST00000551079 LINC00527Q9UJ94 153 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 RPL26L1Q9UNX3 145 aaKnown RBP0.93□□□□□ -2.26
GPN3-209ENST00000551079 KIAA0232Q92628 1395 aa0.93□□□□□ -2.26
GPN3-209ENST00000551079 SLX4Q8IY92 1834 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 C11orf86A6NJI1 115 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 C9J4A7 227 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 IVLP07476 585 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 ORM2P19652 201 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 NPPCP23582 126 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 CRHBPP24387 322 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 FAM3AP98173 230 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 RAB31Q13636 194 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 UAP1Q16222 522 aaPredicted RBP0.92□□□□□ -2.26
GPN3-209ENST00000551079 TMEM249Q2WGJ8 235 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 TTC33Q6PID6 262 aaPredicted RBP0.92□□□□□ -2.26
GPN3-209ENST00000551079 LHFPL5Q8TAF8 219 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 SPACA4Q8TDM5 124 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 RORBQ92753 470 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 DNAJC12Q9UKB3 198 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 HHLA2Q9UM44 414 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 SNX12Q9UMY4 172 aa0.92□□□□□ -2.26
GPN3-209ENST00000551079 PUS1Q9Y606 427 aaKnown RBP eCLIP0.92□□□□□ -2.26
GPN3-209ENST00000551079 C2orf74A8MZ97 194 aa0.91□□□□□ -2.26
GPN3-209ENST00000551079 M0QYV0 167 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms