RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 C9orf16Q9BUW7 83 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 PRRG3Q9BZD7 231 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 SLITRK2Q9H156 845 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 METTL8Q9H825 291 aaKnown RBP3.83□□□□□ -1.8
SCAF11-214ENST00000550893 RCC2Q9P258 522 aaKnown RBP3.83□□□□□ -1.8
SCAF11-214ENST00000550893 OR14J1Q9UGF5 321 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 PSORS1C1Q9UIG5 152 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.83□□□□□ -1.8
SCAF11-214ENST00000550893 HHLA2Q9UM44 414 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 GTF2A1LQ9UNN4 478 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 FOXJ3Q9UPW0 622 aa3.83□□□□□ -1.8
SCAF11-214ENST00000550893 PLECQ15149 4684 aaKnown RBP3.83□□□□□ -1.8
SCAF11-214ENST00000550893 NBEAL2Q6ZNJ1 2754 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 TRAV39A0A0B4J263 110 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 A0A1W2PPI3 338 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 DAPL1A0PJW8 107 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 MEIOCA2RUB1 952 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 CLPSL1A2RUU4 121 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 C15orf65H3BRN8 121 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 M0QZ24 198 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 SIRPB1O00241 398 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 SULT1B1O43704 296 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 GPX5O75715 221 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 ZNF728P0DKX0 622 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 VHLP40337 213 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 POU3F4P49335 361 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 SNU13P55769 128 aaKnown RBP3.82□□□□□ -1.8
SCAF11-214ENST00000550893 QRFPP83859 136 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 MZT1Q08AG7 82 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 ACSM1Q08AH1 577 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 GAGE5Q13069 117 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 GAGE6Q13070 117 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 PLA2G7Q13093 441 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 DCTN2Q13561 401 aaKnown RBP3.82□□□□□ -1.8
SCAF11-214ENST00000550893 KISS1Q15726 138 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 LY6EQ16553 131 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 LRRC36Q1X8D7 754 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 NHLRC3Q5JS37 347 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 TMEM244Q5VVB8 128 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 SLC35E4Q6ICL7 350 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 ZBTB49Q6ZSB9 765 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 LRRTM1Q86UE6 522 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 COMMD2Q86X83 199 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 SAXO1Q8IYX7 474 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 FAM58AQ8N1B3 248 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 FTMTQ8N4E7 242 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 TEX29Q8N6K0 151 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 ZNF439Q8NDP4 499 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 TMEM104Q8NE00 496 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 PXT1Q8NFP0 134 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 OR10V1Q8NGI7 309 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 OR4D6Q8NGJ1 314 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 OR52N1Q8NH53 320 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 ZNF596Q8TC21 504 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 CORO2AQ92828 525 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 EMG1Q92979 244 aaKnown RBP3.82□□□□□ -1.8
SCAF11-214ENST00000550893 SMIM19Q96E16 107 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 TMEM68Q96MH6 324 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 DERL3Q96Q80 235 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 OR5M11Q96RB7 305 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 PPA2Q9H2U2 334 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 PLCXD1Q9NUJ7 323 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 IMPAD1Q9NX62 359 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 ENOPH1Q9UHY7 261 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 LINC00312Q9Y6C7 94 aa3.82□□□□□ -1.8
SCAF11-214ENST00000550893 A0A1W2PQ09 198 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 ODAMA1E959 279 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 TMEM212A6NML5 194 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 FAM90A26D6RGX4 464 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 SLC1A7O00341 560 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 SLC31A2O15432 143 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 GATBO75879 557 aaKnown RBP3.81□□□□□ -1.8
SCAF11-214ENST00000550893 CDRT1O95170 752 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 FBP1P09467 338 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 PRKACAP17612 351 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 CD24P25063 80 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 ERP29P30040 261 aaKnown RBP3.81□□□□□ -1.8
SCAF11-214ENST00000550893 SSTR5P35346 364 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 CAPGP40121 348 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 RBP2P50120 134 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 DYNLT3P51808 116 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 RBM11P57052 281 aaKnown RBP3.81□□□□□ -1.8
SCAF11-214ENST00000550893 KRTAP10-5P60370 271 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 ACTA2P62736 377 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 BLCAPP62952 87 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 ACTG2P63267 376 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 SLC35A2P78381 396 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 AESQ08117 197 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 UNC119Q13432 240 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 EDDM3AQ14507 147 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 ATXN7L3Q14CW9 347 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-214ENST00000550893 SNCBQ16143 134 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 AANATQ16613 207 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 LRRC75BQ2VPJ9 315 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 TMEM30BQ3MIR4 351 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 C14orf177Q52M58 125 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 SPIN3Q5JUX0 258 aa3.81□□□□□ -1.8
SCAF11-214ENST00000550893 KPRPQ5T749 579 aaPredicted RBP3.81□□□□□ -1.8
SCAF11-214ENST00000550893 NCR3LG1Q68D85 454 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms