RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 SLC23A1Q9UHI7 598 aa13.11□□□□□ -0.31
CHMP1A-209ENST00000550872 SSX5O60225 188 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 GSTT2P0CG29 244 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 GSTT2BP0CG30 244 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 PTHLHP12272 177 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 ZBTB25P24278 435 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 IL3RAP26951 378 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 CEACAM6P40199 344 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 RAB13P51153 203 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 TAS2R20P59543 309 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 SRSF7Q16629 238 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 KRTAP24-1Q3LI83 254 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 FAM216AQ8WUB2 273 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 TOMM40LQ969M1 308 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 OR1A1Q9P1Q5 309 aa13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 MRPS7Q9Y2R9 242 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-209ENST00000550872 IGKV1-6A0A0C4DH72 117 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 RNF212BA8MTL3 300 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 VGLL3A8MV65 326 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 OOSP1A8MZH6 123 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 CTDSP2O14595 271 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 RGS5O15539 181 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 LY6EQ16553 131 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 IGSF11Q5DX21 431 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 LY6G6FQ5SQ64 297 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 CCDC144NLQ6NUI1 221 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 Q6ZS49 121 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 ABHD14AQ9BUJ0 271 aa13.09□□□□□ -0.31
CHMP1A-209ENST00000550872 IGKV1D-8A0A087WSZ0 117 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 BET1O15155 118 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 BRS3P32247 399 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 DYNLT3P51808 116 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 DIAPH2-AS1Q14236 149 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 HERPUD1Q15011 391 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 LYG1Q8N1E2 194 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 OR2AK2Q8NG84 335 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 PIFOQ8TCI5 191 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 CABLES2Q9BTV7 478 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
CHMP1A-209ENST00000550872 FAM181BA6NEQ2 426 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 HSD17B6O14756 317 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 GPR137BO60478 399 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 HLA-DQB1P01920 261 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 GAPDHP04406 335 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 CRYBA1P05813 215 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 PRSS3P35030 304 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 CBX5P45973 191 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 REG1BP48304 166 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 RAB7AP51149 207 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 OR10J5Q8NHC4 309 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 DCUN1D5Q9BTE7 237 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 C6orf62Q9GZU0 229 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 MIXL1Q9H2W2 232 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 NDUFA13Q9P0J0 144 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 EXTL2Q9UBQ6 330 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 ADAM30Q9UKF2 790 aa13.07□□□□□ -0.32
CHMP1A-209ENST00000550872 MEIS3P1A6NDR6 274 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 ST8SIA5O15466 376 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 DIRAS3O95661 229 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 FCER2P06734 321 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 ACTG1P63261 375 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 ZNF816Q0VGE8 651 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 HOGA1Q86XE5 327 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 SNX29P2Q8IUI4 249 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 OR8H3Q8N146 312 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 GVQW1Q8N7I0 195 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 BEST4Q8NFU0 473 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 MCFD2Q8NI22 146 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 EDARADDQ8WWZ3 215 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 GCDHQ92947 438 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 ST6GALNAC6Q969X2 333 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 GINS4Q9BRT9 223 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 C19orf24Q9BVV8 132 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 SLIRPQ9GZT3 109 aaKnown RBP13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 C11orf54Q9H0W9 315 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 RDH8Q9NYR8 311 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 ANXA10Q9UJ72 324 aa13.06□□□□□ -0.32
CHMP1A-209ENST00000550872 TRBV6-7A0A0A0MS04 114 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 DPPA5A6NC42 116 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 TIMM23O14925 209 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 LPLP06858 475 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 CTXN2P0C2S0 81 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 CD24P25063 80 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 CNIH2Q6PI25 160 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 TGIF2LXQ8IUE1 241 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 DRAM1Q8N682 238 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 CAPSLQ8WWF8 208 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 DGCR14Q96DF8 476 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 IFT46Q9NQC8 304 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 PITPNC1Q9UKF7 332 aa13.05□□□□□ -0.32
CHMP1A-209ENST00000550872 RNF150Q9ULK6 438 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms