RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 SMIM18P0DKX4 95 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 GNB3P16520 340 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 TALDO1P37837 337 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 REG1BP48304 166 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 LSM3P62310 102 aaKnown RBP20.79■□□□□ 0.92
CPSF6-205ENST00000550075 DIAPH2-AS1Q14236 149 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 HES1Q14469 280 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 Q6ZPA2 131 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 MOB3BQ86TA1 216 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 TGIF2LXQ8IUE1 241 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 LYG1Q8N1E2 194 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 OR13F1Q8NGS4 319 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 RTN4IP1Q8WWV3 396 aaPredicted RBP20.79■□□□□ 0.92
CPSF6-205ENST00000550075 CFHR4Q92496 578 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 RBM14Q96PK6 669 aaKnown RBP20.79■□□□□ 0.92
CPSF6-205ENST00000550075 HSPA12AO43301 675 aa20.78■□□□□ 0.92
CPSF6-205ENST00000550075 KIR2DS1Q14954 304 aa20.78■□□□□ 0.92
CPSF6-205ENST00000550075 ST6GALNAC6Q969X2 333 aa20.78■□□□□ 0.92
CPSF6-205ENST00000550075 FUNDC2Q9BWH2 189 aa20.78■□□□□ 0.92
CPSF6-205ENST00000550075 ZNF702PQ9H963 129 aa20.78■□□□□ 0.92
CPSF6-205ENST00000550075 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.78■□□□□ 0.92
CPSF6-205ENST00000550075 KCNK7Q9Y2U2 307 aa20.78■□□□□ 0.92
CPSF6-205ENST00000550075 FAM90A9PA6NNJ1 464 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 TRDCB7Z8K6 153 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 FCGR3AP08637 254 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 TMEM11P17152 192 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 ZBTB25P24278 435 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 ZNF134P52741 427 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 HABP2Q14520 560 aaPredicted RBP20.77■□□□□ 0.92
CPSF6-205ENST00000550075 C5orf24Q7Z6I8 188 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 Q8N2B8 174 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 SGMS2Q8NHU3 365 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 EDARADDQ8WWZ3 215 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 SLC23A1Q9UHI7 598 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 MOB4Q9Y3A3 225 aa20.77■□□□□ 0.92
CPSF6-205ENST00000550075 LANCL1O43813 399 aa20.76■□□□□ 0.91
CPSF6-205ENST00000550075 IZUMO1Q8IYV9 350 aa20.76■□□□□ 0.91
CPSF6-205ENST00000550075 OR4A4PQ8NGN8 299 aa20.76■□□□□ 0.91
CPSF6-205ENST00000550075 IGKV1D-33P01593 117 aa20.75■□□□□ 0.91
CPSF6-205ENST00000550075 IGKV1-33P01594 117 aa20.75■□□□□ 0.91
CPSF6-205ENST00000550075 GSTP1P09211 210 aaKnown RBP20.75■□□□□ 0.91
CPSF6-205ENST00000550075 SERPINB10P48595 397 aa20.75■□□□□ 0.91
CPSF6-205ENST00000550075 CDNFQ49AH0 187 aa20.75■□□□□ 0.91
CPSF6-205ENST00000550075 SIGLEC9Q9Y336 463 aa20.75■□□□□ 0.91
CPSF6-205ENST00000550075 A0A0A6YYH2 397 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 A6NJ64 397 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 ITGB1BP1O14713 200 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 FABP7O15540 132 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 PEX14O75381 377 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 SCTP09683 121 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 CD1BP29016 333 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 TGFBR1P36897 503 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 PITPNAQ00169 270 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 CITED1Q99966 193 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 PIPOXQ9P0Z9 390 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 SPATA2Q9UM82 520 aa20.74■□□□□ 0.91
CPSF6-205ENST00000550075 DIRAS3O95661 229 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 DTYMKP23919 212 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 RPS19P39019 145 aaKnown RBP20.73■□□□□ 0.91
CPSF6-205ENST00000550075 VDAC2P45880 294 aaPredicted RBP20.73■□□□□ 0.91
CPSF6-205ENST00000550075 HACD4Q5VWC8 232 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 FAM71F2Q6NXP2 309 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 OR5H6Q8NGV6 325 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 OR2T10Q8NGZ9 312 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 GHITMQ9H3K2 345 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 OR1A1Q9P1Q5 309 aa20.73■□□□□ 0.91
CPSF6-205ENST00000550075 IGHV3-72A0A0B4J1Y9 119 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 CEACAM6P40199 344 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 GNG2P59768 71 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 SRSF7Q16629 238 aaKnown RBP eCLIP20.72■□□□□ 0.91
CPSF6-205ENST00000550075 PNLIPRP3Q17RR3 467 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 KLHDC1Q8N7A1 406 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 SLC25A38Q96DW6 304 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 S1PR3Q99500 378 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 IFI27L2Q9H2X8 130 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 DIABLOQ9NR28 239 aa20.72■□□□□ 0.91
CPSF6-205ENST00000550075 RAB29O14966 203 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 ST8SIA5O15466 376 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 NCS1P62166 190 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 BLCAPP62952 87 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 EBI3Q14213 229 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 FBLN7Q53RD9 439 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 Q6ZS49 121 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 SLC25A46Q96AG3 418 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 KCTD12Q96CX2 325 aaKnown RBP20.71■□□□□ 0.91
CPSF6-205ENST00000550075 CABLES2Q9BTV7 478 aa20.71■□□□□ 0.91
CPSF6-205ENST00000550075 SAA2-SAA4A0A096LPE2 208 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 TMEM235A6NFC5 223 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 FGF16O43320 207 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 MOSP00540 346 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 SAA2P0DJI9 122 aaPredicted RBP20.7■□□□□ 0.9
CPSF6-205ENST00000550075 VBP1P61758 197 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 LSAMPQ13449 338 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 HNF4GQ14541 408 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 ABCA11PQ4W5N1 156 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 ZNF833PQ6ZTB9 187 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 GPR141Q7Z602 305 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 ANKRD13BQ86YJ7 626 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 ODF3L1Q8IXM7 274 aa20.7■□□□□ 0.9
CPSF6-205ENST00000550075 EAF1Q96JC9 268 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms