RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 TCTAP57738 103 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ACTA2P62736 377 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 HERV-K104P63124 156 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 RPL38P63173 70 aaKnown RBP1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ACTG2P63267 376 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ACTC1P68032 377 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ACTA1P68133 377 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 HBA1P69905 142 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ADARB1P78563 741 aaKnown RBP1.97□□□□□ -2.09
CNOT2-216ENST00000548939 SCRN3Q0VDG4 424 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 FUT5Q11128 374 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 SYPL1Q16563 259 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 DEFB135Q30KP9 77 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 LGALS9BQ3B8N2 356 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 LDLRAD2Q5SZI1 272 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 STUMQ69YW2 141 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 OR4F3Q6IEY1 312 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 LCN12Q6JVE5 192 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 C5orf46Q6UWT4 87 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ZYG11AQ6WRX3 759 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ZNF767PQ75MW2 155 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 PGAP1Q75T13 922 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 MRPL21Q7Z2W9 205 aaKnown RBP1.97□□□□□ -2.09
CNOT2-216ENST00000548939 DPY19L4Q7Z388 723 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 PGAM4Q8N0Y7 254 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 SUMF2Q8NBJ7 301 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 MNS1Q8NEH6 495 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 SPATA4Q8NEY3 305 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 OR2T27Q8NH04 317 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 OR5J2Q8NH18 312 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 OR5K1Q8NHB7 308 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 TCP10LQ8TDR4 215 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 HIST1H2ACQ93077 130 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ITFG2Q969R8 447 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 APOBEC3DQ96AK3 386 aaPredicted RBP1.97□□□□□ -2.09
CNOT2-216ENST00000548939 GAFA1Q96PS6 74 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 CCT7Q99832 543 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 WFDC6Q9BQY6 131 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 MFFQ9GZY8 342 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 TXNIPQ9H3M7 391 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 ARMC7Q9H6L4 198 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 RNPEPL1Q9HAU8 725 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 SLC2A8Q9NY64 477 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 MRPL39Q9NYK5 338 aaKnown RBP1.97□□□□□ -2.09
CNOT2-216ENST00000548939 APLNQ9ULZ1 77 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 TMCO1Q9UM00 188 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 FOXA2Q9Y261 457 aaPredicted RBP1.97□□□□□ -2.09
CNOT2-216ENST00000548939 PIGLQ9Y2B2 252 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 POLR1DQ9Y2S0 133 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 KLHDC2Q9Y2U9 406 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 FIS1Q9Y3D6 152 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 COMMD3-BMI1R4GMX3 469 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 LRP2P98164 4655 aa1.97□□□□□ -2.09
CNOT2-216ENST00000548939 IGKV1D-42A0A075B6H8 117 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 IGKV1D-43A0A0B4J1Z2 117 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 TRBV7-9A0A0J9YWB2 115 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 A0A1B0GWA3 101 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 SMIM23A6NLE4 172 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 OR2AT4A6NND4 320 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 DHRS7CA6NNS2 312 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 A8MT66 165 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 H3BQF6 201 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 I3L521 148 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 BHLHE40O14503 412 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 CDIPTO14735 213 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 CHEK1O14757 476 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 AKR7A2O43488 359 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 FMO6PO60774 539 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 TBX19O60806 448 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 MED6O75586 246 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 IFNA21P01568 189 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 IFNA17P01571 189 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 BGLAPP02818 100 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 SHBGP04278 402 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 CD7P09564 240 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 P0DMU3 169 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 FAM231AP0DMU4 169 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 FAM231CP0DMU5 169 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 H2AFXP16104 143 aaPredicted RBP1.96□□□□□ -2.1
CNOT2-216ENST00000548939 CTRB1P17538 263 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 MSR1P21757 451 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 SERPINB5P36952 375 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 MDH1P40925 334 aaKnown RBP1.96□□□□□ -2.1
CNOT2-216ENST00000548939 KIR3DL2P43630 455 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 PKNOX1P55347 436 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 NCALDP61601 193 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 BNIP1Q12981 228 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 MOBPQ13875 183 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 GUCA2BQ16661 112 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 WHAMMP3Q1A5X7 153 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 ZNF678Q5SXM1 525 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 C10orf128Q5T292 105 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 MINOS1Q5TGZ0 78 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 FAM27BQ5VT28 67 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 CTRB2Q6GPI1 263 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 LINC00322Q6ZN03 302 aaPredicted RBP1.96□□□□□ -2.1
CNOT2-216ENST00000548939 HDDC2Q7Z4H3 204 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 NANOGNBQ7Z5D8 188 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 CLECL1Q8IZS7 167 aa1.96□□□□□ -2.1
CNOT2-216ENST00000548939 CENPSQ8N2Z9 138 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms