RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 IGKV1-33P01594 117 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 GTF3C1Q12789 2109 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 ADIRFQ15847 76 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 CLEC12BQ2HXU8 276 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 LRRC75BQ2VPJ9 315 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 RIMS4Q9H426 269 aaPredicted RBP11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 ELOA3CA0A087WX78 387 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 ANKRD30BLA7E2S9 258 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 DEGS1O15121 323 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 WNT5AP41221 380 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 LHX2P50458 406 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 PNRC1Q12796 327 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 TRIOBPQ9H2D6 2365 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 IGKV3D-15A0A087WSY6 115 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 SS18L1O75177 396 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 ZNF737O75373 536 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 SLC25A6P12236 298 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 RPS16P62249 146 aaKnown RBP11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 NRN1LQ496H8 165 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 C14orf144Q96I85 54 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 HIST1H2BLQ99880 126 aa11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 WDR61Q9GZS3 305 aaKnown RBP11.97□□□□□ -0.49
RAPGEF3-218ENST00000548919 TUBG1P23258 451 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 CLDN18P56856 261 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 CD81P60033 236 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 TMEM41BQ5BJD5 291 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 FAM53AQ6NSI3 398 aaPredicted RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 TIPARPQ7Z3E1 657 aaKnown RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 RPP25LQ8N5L8 163 aaKnown RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 RPUSD4Q96CM3 377 aaKnown RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 UFSP2Q9NUQ7 469 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 TMEM242Q9NWH2 141 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 USF3Q68DE3 2245 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 YKT6O15498 198 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 GNG3P63215 75 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 HBG1P69891 147 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 HBG2P69892 147 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 ZNF573Q86YE8 665 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 CT55Q8WUE5 264 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 GTF3AQ92664 365 aaKnown RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 LHX4Q969G2 390 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 LSM10Q969L4 123 aaKnown RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 THOC3Q96J01 351 aaKnown RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 PSMG3Q9BT73 122 aaPredicted RBP11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 LINC00470Q9BZP3 86 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 TRAPPC2LQ9UL33 140 aa11.96□□□□□ -0.49
RAPGEF3-218ENST00000548919 CACNA1DQ01668 2161 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 TRBV6-6A0A0A6YYG2 114 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 MAGEA5P43359 124 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 Q6P435 159 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 C16orf82Q7Z2V1 217 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 MRGPRGQ86SM5 289 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 OR4X1Q8NH49 305 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 TAF15Q92804 592 aaKnown RBP eCLIP11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 SMOC1Q9H4F8 434 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 SLC25A22Q9H936 323 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 GAB2Q9UQC2 676 aa11.96□□□□□ -0.5
RAPGEF3-218ENST00000548919 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 ZXDAP98168 799 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 SLC38A11Q08AI6 406 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 RTP5Q14D33 572 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 NUFIP2Q7Z417 695 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 APH1AQ96BI3 265 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 MEGF10Q96KG7 1140 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 C12orf49Q9H741 205 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 TMEM9BQ9NQ34 198 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 SLC39A9Q9NUM3 307 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 RNF150Q9ULK6 438 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 BOKQ9UMX3 212 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 LOC400499M0QZD8 3231 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 TRBV24-1A0A075B6N3 115 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 RAMP3O60896 148 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 CLDN1O95832 211 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 DEFA4P12838 97 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 SELEP16581 610 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 CEACAM6P40199 344 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 ERVS71-1P61550 626 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 SERF2P84101 59 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 TRA2AQ13595 282 aaKnown RBP eCLIP11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 LINC00596Q86U02 117 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 FGFRL1Q8N441 504 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 DRAM1Q8N682 238 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 OR2M7Q8NG81 312 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 OR51I2Q9H344 312 aa11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 ZNF703Q9H7S9 590 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-218ENST00000548919 ASPMQ8IZT6 3477 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 NEURL1O76050 574 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 OR2H2O95918 312 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 OPN1MWP04001 364 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 OPN1MW2P0DN77 364 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 OPN1MW3P0DN78 364 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 IL2RGP31785 369 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 PLP2Q04941 152 aa11.94□□□□□ -0.5
RAPGEF3-218ENST00000548919 NCR3LG1Q68D85 454 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms