RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ELK1P19419 428 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 CD34P28906 385 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 OTX1P32242 354 aaPredicted RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 MDH1P40925 334 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 GUCA1AP43080 201 aaPredicted RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 NPBWR2P48146 333 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 RAB9AP51151 201 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 DAP3P51398 398 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 UGT2B15P54855 530 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 RPL38P63173 70 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 TPM4P67936 248 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 BDH1Q02338 343 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 ZNF85Q03923 595 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 CD47Q08722 323 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 RAB40BQ12829 278 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 HES1Q14469 280 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 PPP1R7Q15435 360 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 RSPO1Q2MKA7 263 aaPredicted RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 TPTE2P1Q5T6R2 138 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 OR4F3Q6IEY1 312 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 ULK3Q6PHR2 472 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 CCDC137Q6PK04 289 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 C2orf66Q6UXQ4 117 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 ZNF767PQ75MW2 155 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 PGAP1Q75T13 922 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 MRPL21Q7Z2W9 205 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 HDDC2Q7Z4H3 204 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 LINC00596Q86U02 117 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 TGIF2LXQ8IUE1 241 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 ZDHHC21Q8IVQ6 265 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 NKAIN4Q8IVV8 208 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 UBE2DNLQ8IWF7 75 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 CTAGE3PQ8IX95 158 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 LRRC34Q8IZ02 419 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 CLECL1Q8IZS7 167 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 LINC00518Q8N0U6 118 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 C6orf223Q8N319 242 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 ZNF676Q8N7Q3 588 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 OR4A15Q8NGL6 344 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 OR9G4Q8NGQ1 327 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 OR2K2Q8NGT1 345 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 OR2T27Q8NH04 317 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 OR8S1Q8NH09 359 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 RNASE8Q8TDE3 154 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 HIST1H2ACQ93077 130 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 SLC35B4Q969S0 331 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 FLYWCH2Q96CP2 140 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 SGTBQ96EQ0 304 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 MRPL57Q9BQC6 102 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 ALG12Q9BV10 488 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 RNF126Q9BV68 326 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 FUNDC2Q9BWH2 189 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 TLNRD1Q9H1K6 362 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 ABCG5Q9H222 651 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 C1orf21Q9H246 121 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 DPH5Q9H2P9 285 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 TMEM133Q9H2Q1 129 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 C11orf68Q9H3H3 251 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 YY1AP1Q9H869 796 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 LZTFL1Q9NQ48 299 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 CENPMQ9NSP4 180 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 STX18Q9P2W9 335 aaKnown RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 MARCOQ9UEW3 520 aaPredicted RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 EMCNQ9ULC0 261 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 FOXA2Q9Y261 457 aaPredicted RBP1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 TMED5Q9Y3A6 229 aa1.49□□□□□ -2.17
DEPDC4-204ENST00000547823 LPAP08519 4548 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 TRAV10A0A0B4J240 114 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 A0A0B4J2E0 115 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 A0A1B0GX12 115 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 SMIM30A4D0T7 59 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 ARRDC5A6NEK1 342 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 FAM183AA6NL82 134 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 ZFP92A6NM28 416 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 NCBP2LA6PVI3 153 aaKnown RBP1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 ZNF850A8MQ14 1090 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 OOSP1A8MZH6 123 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 TMEM114B3SHH9 223 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 G3V318 75 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 BUB1B-PAK6H3BSN5 160 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 BHLHE40O14503 412 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 RER1O15258 196 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 FMO6PO60774 539 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 CPSF4O95639 269 aaKnown RBP1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 SERPINA1P01009 418 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 IFNA21P01568 189 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 IFNA17P01571 189 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 IGKV1D-33P01593 117 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 IGKV1-33P01594 117 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 IGLV1-47P01700 117 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 IGHV3-11P01762 117 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 ACSM4P0C7M7 580 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 ASAH2BP0C7U1 165 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 NEFHP12036 1026 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 SERPINB5P36952 375 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 CEACAM3P40198 252 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 MAGEA12P43365 314 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 KIR2DS2P43631 304 aa1.48□□□□□ -2.17
DEPDC4-204ENST00000547823 GPR4P46093 362 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms